Tag | Content |
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EnhancerAtlas ID | HS140-01856 |
Organism | Homo sapiens |
Tissue/cell | Namalwa |
Coordinate | chr20:52549850-52552880 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr20:52552629-52552650 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 | IRF1 | MA0050.2 | chr20:52549880-52549901 | CTTTTCTTTCTTTTTCTTTTC | + | 6.65 | PRDM1 | MA0508.2 | chr20:52551963-52551973 | GTGAAAGTGA | - | 6.02 | ZNF263 | MA0528.1 | chr20:52552262-52552283 | CCCTTCCCTTTTTTCTCCTCT | - | 6.14 | ZNF263 | MA0528.1 | chr20:52552220-52552241 | TTCCCTTCCCTCCCCTCCCTT | - | 6.28 | ZNF263 | MA0528.1 | chr20:52552215-52552236 | TTCCCTTCCCTTCCCTCCCCT | - | 6.55 | ZNF263 | MA0528.1 | chr20:52552240-52552261 | TCTCCTCCCCTCCCCTCCCCT | - | 6.63 | ZNF263 | MA0528.1 | chr20:52552230-52552251 | TCCCCTCCCTTCTCCTCCCCT | - | 7.12 | ZNF263 | MA0528.1 | chr20:52552224-52552245 | CTTCCCTCCCCTCCCTTCTCC | - | 7.51 | ZNF263 | MA0528.1 | chr20:52552227-52552248 | CCCTCCCCTCCCTTCTCCTCC | - | 8.64 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_02347 | chr20:52550880-52552204 | Astrocytes | SE_09242 | chr20:52549594-52558523 | CD14 | SE_32564 | chr20:52549776-52553004 | GM12878 | SE_43881 | chr20:52549524-52553090 | MM1S | SE_44725 | chr20:52550546-52552444 | NHDF-Ad | SE_45734 | chr20:52550205-52552502 | Osteoblasts | SE_47103 | chr20:52549854-52553091 | Panc1 | SE_50210 | chr20:52550767-52552825 | Sigmoid_Colon | SE_54237 | chr20:52549938-52550582 | Spleen | SE_54237 | chr20:52550654-52552885 | Spleen | SE_55669 | chr20:52549620-52552919 | u87 | SE_58343 | chr20:52504838-52566516 | Ly1 | SE_59659 | chr20:52530452-52560771 | Ly4 | SE_61260 | chr20:52530677-52566553 | HBL1 | SE_61584 | chr20:52509092-52566555 | Toledo | SE_62724 | chr20:52509006-52567043 | Tonsil | SE_67521 | chr20:52549620-52552919 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I053933 | chr20 | 52549777 | 52553138 |
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Enhancer Sequence | TTTTTTAAAC CCCTTTTGTT TTTCTTTCTT CTTTTCTTTC TTTTTCTTTT CCATCTTATC 60 TTTTTTTTTT TTTTTTAAGG AGTTTGTCCT CAGACTTTGA TTAGTTCTGC TGAATCAGCT 120 GTCAGTCTTA TTGTTGCTTT CAATTGAAGT GGAGCACTGC ATCTCTCTTT TAGGATGCCT 180 TCGAGGTATT TGTCTAGCTT TCATGTTTGT ACTCAGTAGG TAAGATGGTC TGCAACTATG 240 TAGCCATTTT TCCCAAGAGA AATTTCACAT ATTAAATGGC TTTGGTTTTC CACAGATGAT 300 GTTAGAGATA GCAAGTGGAG GTAGAGGGAA TGAAGGGAGA TCAAATCAAG AGAGGTTAAG 360 ATAGAGGAAG TAGCTTTACC TAAGGTGAGT AGACCCTAGA CAACTGGCAG AACGCTGGGC 420 CAAAGGAAAG ATATAGGGGG CAGGATGGCA TTTTCTGCAG ATAAATGACC CCAGAAATTC 480 AGACACTGTG ATATCCAATA TTCACTTTAT ATCTCTCTTT ATTGTGTTGT ATTTCCCTTA 540 AGTAAGTGAG GTTCAGAGAG GATAATCAGC TTGTCCAACA TCAAACAGCC GGTCAGAGTG 600 ACAGGCTGAC ATTCAAACTC ATGCCAGTAG ACTCTAGATC CCACACCTTT CGCTGCTGAA 660 CTATATTAAA GATCAGAGGC TTTTAAAGTT TTCTTATTAC AAATCATAAT AAGAAATACA 720 TTTTGAGTCT ATACACATAC ATTAGTAATC AAAACAAACC TTCCACTAAT GGATGTTAAC 780 CATATTACCC GTGATGCACC ATGAGCTTTC TGTTGTATTC TATTCTATTC CATTCTGTTC 840 CATTCCATTT CATTTGCTGG ATCAACATAA GTGGGTTGGG CCCTGGCTTC AAATAAAAAC 900 CACTGCTAAA GACAGGAACT TACCTTAAAG GTTAAAAAAA GTACATAACT CCGATTAGCC 960 AAGAAAAACT CAGAAAGTGA GAAGGAAGGG CAAAAAAAAA AAAAAAAAAG TCACTTCTTT 1020 TTGTCTTTCA GGAATTTTAA TAATAAAACA GCTTTGGATC ACCTATTTTA GATTCTTCTA 1080 GTAGACAGCC CCCAGTAGAT TCCTTAACTT TTCAAATGGC ATTGAAAAAG CGAGGAAGTT 1140 ATTTCACCTC TTTGGGAGGC TGTCTCAGTC CTCTCTATCC ATTGGAGGGC AGGGCAGCCA 1200 CTCAATAAGT GTCTGTTGCA TGAGTCAAGT AAAGGATCAG ACCGGGGTGT CTCAGAGCCT 1260 TCCCTGCTCT TCTATTCTCT GTTAAGCCAC TGAATGAAGA AGGCTGCCAC ATTTTCCTCT 1320 GGGTCAATAT CAACAGCAAA ACAATATCCC AGAACGGTCA TTTCTGGGAC AATAAATAGT 1380 TTTCCAGAGC TGCTATCTTA GGCCTCTCTG CCACTAAGGG ATTAAAGAGA AATGCACACC 1440 CCTCCAGAAT TTCCTGTCCT GTCTTGCGGT TAACTTAAAA CATTTTCAAC TCCCGCCTCC 1500 CCCTTTCTCA CCATCTCTCT TCATGGTTAA AGAGGTTATA AATTTGCAAA GGAAATGATT 1560 AAGCAAATCC AGAAAATTTG GCCATGGGAC CTGATTTTTC AAGGCCTTAG TTTTTGAAAG 1620 CTGAAGAAAT CTGTCCACTG AAGGATTTGC ACATGAGTTT TTTAGTCTTA GGGCTGGGGC 1680 ATAATTTCCT GTTTTTGTAT TCTCAAAACT GTTAAGCTAC TTGTGAACAA CTGGCCAGCA 1740 AAGATAGGGA GGGGGCAGGG GATGCGGAGA GAGGGTTGTG AGCCCAGAGG GGAGGAGAAA 1800 GGCTGTTTCT CCTCAGTTCT CACAGAACCT CTATGAAAAT AGAAAGATTT ATTTATTTAT 1860 TTACTTTAAA GACTGTGAAG TAGAGACAAG GGGTAGATTC TAGACATTGA AGTTGGAGGT 1920 GTGAGTGGTA AAGAGGAGAA GAAACATGTT TTAGCAGGAA CTTGAATAAG CTGATTGAAA 1980 CTCAAAGAAC AGTCTGTTTC CATAAGCATG AACATTTCTT AGACACTCAT TTTGTGCTTT 2040 GCATGGAATA CATCGTTAAA TCCCCACAGC AACTCAGTGA GGTGGATTCT ACTAGTGTCT 2100 CCACTTTATG GATGTGAAAG TGAAGCTGGA AGAAGTTAAG GAACCTGCTC AAAGCCACGT 2160 GGCTAGCAAG TAGCACCACT GGGATTGCAA CCAAGGCTGT TTGGACCCAG AGCCTGTGTT 2220 CATAGCTACT GCTCTCTTCT GAAGATAAAG GAGGAGACAA GGATGTCAGC ATGACCATAG 2280 CATACATGTT CATTTATTTA GAGCCAGGGA AGGGGGTGGG ACACTAATCA AGGTTGCCCC 2340 TTCCCTTCAC TTCCCTTCCC TTCCCTTCCC TTCCCTTCCC TCCCCTCCCT TCTCCTCCCC 2400 TCCCCTCCCC TTCCCTTCCC TTTTTTCTCC TCTTAAAGCC ACCAACTGTG CTAGGTATTT 2460 GTATGTTTAC TCTCAGATCA TTTTTCCAAG CTTCTCTTCA AACTGCATTT CCCAGGTTCC 2520 ATTACCAACT GGCTTCTGGT TAAGTTCAGC CAGTGGGCGG CACTGACACG TATTTTTCCT 2580 GCCTCCTCCC TCCAGTCAAC AAAAAGGTAC TGCTTGCAGA AGCCTCCATT GGGTTCCAGC 2640 TACCCTCAAG CAGCCTCACC CCCATCCACA TGGGGTTCTA TTTCCCACAG GGTGCCGGGT 2700 TCCCTAGCTC CAGAAGCATC ACCTCTTCCC TTTGGCTGTG TGTCTCTAGT GGTGGTTCTT 2760 TTTGTAGCCT ATTTCTATTT CTTTCTTTCT TTTTTTTTTT AAATTATACT TTAAGTTTTA 2820 GGGTACATGT GCACAATGTG CAGGTTAGTT ACATAGGTAT ACATGTGCCA TGTTCTATTT 2880 CTAATCTCCG GGTGGGCCTC ACGGCCCCAT GGTTGTCTTT TCAACTCTTC CAGTACCTTT 2940 AAAACTAGCA CCCATATTAA TGTCCTTCTA TTCAGCTCCT TGTCATGGGA TAGAGGTTCC 3000 CGAGAAAACC CTAAGACACA GATCACAGAT 3030
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