Tag | Content |
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EnhancerAtlas ID | HS140-01621 |
Organism | Homo sapiens |
Tissue/cell | Namalwa |
Coordinate | chr2:54860190-54864840 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXC1 | MA0032.2 | chr2:54861798-54861809 | TAAGTAAACAT | + | 6.02 | Foxa2 | MA0047.2 | chr2:54861796-54861808 | ACTAAGTAAACA | - | 6.44 | Mecom | MA0029.1 | chr2:54864700-54864714 | CTTTATCTTGTCTC | - | 6.11 | RELA | MA0107.1 | chr2:54862995-54863005 | GGGAATTTCC | + | 6.02 | SPIC | MA0687.1 | chr2:54864807-54864821 | TACTTCCTTTTTTA | - | 6.31 |
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| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_00006 | chr2:54838665-54870676 | Adipose_Nuclei | SE_00896 | chr2:54860461-54861048 | Adrenal_Gland | SE_00896 | chr2:54861190-54861757 | Adrenal_Gland | SE_00896 | chr2:54861758-54862971 | Adrenal_Gland | SE_00896 | chr2:54863505-54864334 | Adrenal_Gland | SE_04102 | chr2:54860996-54863149 | Brain_Anterior_Caudate | SE_04102 | chr2:54863404-54864515 | Brain_Anterior_Caudate | SE_07789 | chr2:54859267-54863115 | Brain_Inferior_Temporal_Lobe | SE_07789 | chr2:54863210-54864870 | Brain_Inferior_Temporal_Lobe | SE_11005 | chr2:54858427-54866655 | CD20 | SE_17333 | chr2:54859718-54862944 | CD4p_CD25-_CD45RAp_Naive | SE_29772 | chr2:54859993-54863637 | Fetal_Muscle | SE_31545 | chr2:54859925-54861051 | Gastric | SE_31545 | chr2:54861123-54862872 | Gastric | SE_31545 | chr2:54863472-54864349 | Gastric | SE_40773 | chr2:54855609-54863256 | Left_Ventricle | SE_40773 | chr2:54863472-54864334 | Left_Ventricle | SE_42137 | chr2:54859148-54863257 | Lung | SE_42137 | chr2:54863462-54864496 | Lung | SE_49296 | chr2:54859664-54861071 | Right_Atrium | SE_49296 | chr2:54861093-54863035 | Right_Atrium | SE_49296 | chr2:54863481-54864340 | Right_Atrium | SE_52386 | chr2:54859296-54861081 | Small_Intestine | SE_52386 | chr2:54861090-54863085 | Small_Intestine | SE_53342 | chr2:54857850-54863077 | Spleen | SE_53342 | chr2:54863300-54864422 | Spleen | SE_61789 | chr2:54844402-54866912 | Toledo | SE_66257 | chr2:54859908-54864393 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr2 | 54860400 | 54863216 | chr2 | 54861155 | 54861205 | chr2 | 54861699 | 54863024 | chr2 | 54863976 | 54864200 |
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| Number: 1 | ID | Chromosome | Start | End |
GH02I054629 | chr2 | 54856191 | 54865204 |
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Enhancer Sequence | GCGATCAGGT GTAAGCCATG CCCTTTGAGG ATTAACACAC GCTTGTGTCA CCTGATAGGA 60 CCCCTGGCGC CAGGTATTCC CAGCCAAGCC CGTGTTCCCC TTCATCCATG AGAAAGAAGC 120 CTGTCAGGAG AGTGGGAAGG GAGGGTGAAG CTTGCTTGTT CTGAGTACCT GGCAAAGCTA 180 CAAAGGAACA TTACCTGGAC TTTTTTAGAA AATTGGCTTG GATAGTGCTG TAATAGGATC 240 TTTTTCATGA TGGAGAGGTA AATAAGAGCA AAGGTTATTT TCCTCTTCTG CCAGGGCATC 300 TCCAGGATTG GATACACTTT CTTCATTTCT TGTTTAAAAT TATTTTTTTA TTTACGTGTG 360 TGTGTGTGTG TGCGTGTGTG TGTCTGTCTG TCTGTCTGAA AGATTTCCTC CCCGGCTGGA 420 GGCCAGTGGA CTCTGTTTGA CCCTAACTCT TTGACTCACT CCTTACTCTT GCCTTGCCCC 480 GGTTACTTAA GTTGGAGGTT GGGGCAGATC AGGGGTTGGA TGCACTAGCA CAGGCCAGTC 540 TGGGCCAGCC ACTGGATCAA TCACTAGCCC CTGTTCCAGT TTGGGTTGAA TTTAAGGGCT 600 TGCTGTGAGA CTGATGTAAT CAAAAAACAA GCCCTTCCTT TCTGCCTCTC TTCTGGCCTT 660 CAAGTGTGTT GGAAAGGAAA AATATTCCTT TGCTTACCAC ATCTGAGAGG GTTTCCTGGG 720 ACCCCTGGTC AGGTTGACTT AAAATAAGAT GGGTGGAGAG GGGATTACTC TGTTTCCAAT 780 AAAGATTGAG CTCCTGTCTT TACCACTTCC AATCTTTTTT TCTGAGCTGA TTCCCAGGCT 840 GAACTATATG TTCTAGGGTG GTATTGTGGA ATAGAGAATA ACTTATGTTA ATTATAATTT 900 TGTATCTGTT GCTTTTAAAA CAGCTGCAAA AAAGAAAAAT AAATCCACCA AACCCTCCTT 960 AAATGAGCAT GAGAAACAGC AATTGGGCAA AGCATTCATA ACCTAGGGAA AAAGAATTTC 1020 CTTTTTTTGT AATATTAACT CTGAGTATTT TGTAAATAAG ATATCCTATG TACTTCCATG 1080 TTAGATGCAC ACAGCTGGTT TCCTGCAGGC GGGCTTGGCT GTTAGGGATG TGTGCATTCA 1140 GGCAGGCATG CAGCTGCCTT GCTGCTTCCT CGGTTTCTTT TTATGTCCCC AGTGCTGCAA 1200 CTGCACAAAG CTGTTGGAAG CAGATGATGC TGTCTAGACT CCTGGATATG ATAAAACGTT 1260 TCAGCAGCAG CAGCCCTCAG TTGTGGCTTA ACCTTCATTT TGCCCTTGAC CAAGAGCCTG 1320 GGCTACTGGT GTTCCAGAGC TTCCTTAGGA TTCCTCAGTT TTAAAAATGA AACGTAAAGA 1380 TAACCCTGTA CTATCAATAA GCATAATAAA GATGGAAGGA GGGAGCTTTC CGATGACCTG 1440 CCATCAGGAG AACTACATTT TCTTATTTTT CTCCATTGAT GTTAACTGAA TTCTGATTTC 1500 ACTTTAATAT CCCCAGAGGC CCACAGAATT GAAACTGACC CTAGAGGGTA CTTGTCAGTT 1560 ATGAAAACAC ACACATCTGT GAGTTCCAGG TGCTGTAGGA GCACAAACTA AGTAAACATC 1620 TAAACCTTCA GATATAATCC CCGCTCCTCG AAACATCCTG ACACTGTGGT GAAGCGATTC 1680 TCCTAGAATG TAAAGTCATT ATAATGTGCT TACGTTCAGG AAGTTTCCTG AGTTGTTGAA 1740 AGAGTACCAG AACAAAGACA CTGACTCTAA CAGATGTGGG TGGGGCATGA GTGGCCTTCA 1800 AAGTGCCTGT GAGTGGGAAG AGACTGTCCT CAGCCTGCCC CAGGGGATGT GAACAGGGAG 1860 GGAGGGAGCT CCTGACCAAG AGGGAAATTC CAGCCACAGC ACAGTTCATG GGGAGCAAGG 1920 AACAGTATCC AGCTTCATAA AGCAAGACCC TGTCTCACAC CGGAAAACAG GCTCAGAAGT 1980 TACCCAGCTG TTTCACTCAG GCACCTGGGG TTCTTGACTA TTCACAGAAA CCAGAACACC 2040 CGCATCTGCT TCATGTGATG AGGGAGCTTT TTTGAGTCTT ATTACAGGGA GAGAAAGTGA 2100 GAGATGGAAA AGCACTCTTT AAGACTGTGG AAACTACTCC CTAGTTTTAA AAGGTCCTTC 2160 TCAGGCCCTT CCCTGTAATT GAATCCGTGA TCCAACATGG AGAGAATTTC CTGAGTTTCA 2220 CTTCCCACGA ATGATGTCCG TTGCACTAGT AAACCATTAA GCCACACTCA CTTCTTTTAA 2280 GCGTCTTCTG AGTCAGCGGC AGTCCCAGAT GCCTGTGTGG CTGTGTTTCA CACCACACGA 2340 AGGCCGTTGT CACACCTGCG CATAGATCGG TGTCATTTGG ACATGTGACT CTAAATCCTT 2400 GCCTCTTTCT TCCCATCTTG ATGGTCCCAC TATAGGAGAA AGGCTGCCTG GGCCGGTAAC 2460 TGCCGGGCAT GCATGAGAGT TGATTATATA AGAAATACAT TCAGGATTCT GTATGGTCAT 2520 ATTTCTCCCT TAATGAATCT TTCCAGTGTT TGAAGTTACT TTCATTTCTG TTATTTCCGT 2580 GAGAGGCGAG GATGTGTGTC CTGTTGTTAA TTTCCAGTAT CTGGGATTCT TCCCTGCCAC 2640 TGTAGGACTT CAATGAGATG CCATGCCAAA GGGAATGGAA TCCTTTATCC CTTTGACTAC 2700 TGGCAGGACT CCTGCATTTG TCACTAAACT CCAACTCATA TTATCTCCTT TCTAAAGATT 2760 TGCGTTCTTG AACTCCCCTA GAAATAGAAC TGGAATTTGA GGGAAGGGAA TTTCCTTTTG 2820 ACATTCCTAA CCCATCCACA TTCTTAGATG ACTAATTCTT TTTAGCCCAA ATTCACTAAC 2880 AATCTTTTAT TTTTTTAAAT TTAATTTTGG TTTCTGATGA TAGATGGCAA TGGCATAAAA 2940 TGTCTCTGGC CTTTATTATT TTTTGTTGTT GTAAAAGCAG TAAATGTCTG ACATTTTCAA 3000 GGGGAAAACT ACTGCCCTTA ATCCCATCTG TAGCATATGC CATTTAAGTG TTTGCTTTCT 3060 AACCCATGCC TTGGAGTTTT ATATCATTTA ATATGTATAA ACTATTTTCA TTTAGCATTA 3120 TAGTATAATT ATTTTTCTAC GTTTGCATTT TGCCTATGTG GTATAAGCAT ATTAAGATCC 3180 CTTTTCCTGA TGCTATGGAA CTCCTTTCAA CTTAAAAAAA TTAAAAAGGC ATTATTTGTG 3240 TCTAACATAT GCCTAATGAT ATTTTTATTT ACAATAATTG TATGTAATAC TGTAATTTAC 3300 ATAATATAAA TTATATATGA TGTTATAACA TGTAAATATG TATAATTTCT ACTGTTCTGT 3360 AGCCACTGGT ACCTGCAGGA GCTATAGGGG CAGAGGGCTT TTCCCTTTGA TTCTCCAGGC 3420 AGACAATGGC TATGACACTG CATTGTCAGC AGCCACTGAG GGCCCGTGTG GTGCATGCAT 3480 CTCTACTCTA AGATCTTTCT TTCTCCTGGG GAAGTTTCTT CAGACACCGG TCAGCAGCAC 3540 GTGTTCACCA AGCTGCTCTT ACTCAGCGTG TTGGAGAATC CAAGGCTATG TGTTCTTCCT 3600 CATCCCTGCC TCAGGGTTTG GTGGATAGAG GAGAGACCTT GTGCAGGCAC AGGCAGAGAG 3660 AAATTGCTCT AAGAATCGAA TGAAAACCCA GCTCTCCTCA GTTGCACTCT GCCTTTATCC 3720 ATCTTAATAC CCTGAATATA GACTGGCTTT CTTGTTTAGG CAACTCAGGA GTATCAAGGA 3780 AGTGTATGTG TGGCAGTGCT TTTGAATCCT CAGTGGGTCC TCCCCTATTG GAAATGAAGC 3840 TCTCCGCTAT TGTAGTGGAG CCACTGGAAG GCAATCCTTT GCTAGGCATT CACGCTGCTA 3900 TTTCTCAGTT TCCAGTCTCT AAGCCACTGG GTGCATGAAG GAAGTTTGCC AAAGAGTGCT 3960 GGCACCTTCA CAGCAGATGG GGAAGGAGCC AAGTAGGGAG CGAGCACCCC CTTTACCTTA 4020 GCGTTTACCA AATTCAGCAG CTCTTTCCAG TTCTTACAAG TTATTTATTT AAGGTTTTGT 4080 GTTTTAACTT CTTTGAGCTT TAGTTACCCT TATCAATTGA TTAAAAGTGG GATTGAGTTA 4140 GTATATAGTC TTACAGGTCT AAAAATTTTC ATTCCTTTTT GTTGTATTTT TGGTGAGTTT 4200 TTTTCAAGAT GAGAAACTCT TTATCAGGAA ACATTTGTTT AAAGCCAGTT ACATGATTAT 4260 ATATATTTTC TTAGCCTTGT ATGTGTCACC CAGTTATGAG CTTCTTGAAA ATAAGTTTCC 4320 ACTTCTCCCC CGGTGCCTAA AATAAGGACT TGTACAAAGC GTGTGCTCAT ATTTTTTTCT 4380 TAACACCAGA TTAGGAAGCA ACAAATTTGT ATAGATCATT TGACAGTATG TTCGGCCTGT 4440 TGTGTGGTTT GGGCAGATTT TTGGGTCTCT CTGGGACCAT GGCTTACTCC TTTGGAGGAT 4500 GCTAAAATCT CTTTATCTTG TCTCCTTCAC ATTATTGAGA ACTGCAAGCA AACTCTTTTT 4560 AGCATAGTTA GGAATTCAGG AAATAAATTG ATTTGTATTC TGTATTTCAA GATTCTCTAC 4620 TTCCTTTTTT AAAAATTATT TTTGTTACCA 4650
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