Tag | Content |
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EnhancerAtlas ID | HS140-00356 |
Organism | Homo sapiens |
Tissue/cell | Namalwa |
Coordinate | chr1:226315010-226316770 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Hnf4a | MA0114.3 | chr1:226315652-226315668 | CGGGTCAAAGTCCTCT | + | 6.49 | STAT3 | MA0144.2 | chr1:226315755-226315766 | CTTCCCAGAAG | - | 6.14 |
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| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_10465 | chr1:226314329-226317263 | CD19_Primary | SE_11118 | chr1:226314228-226323738 | CD20 | SE_23364 | chr1:226314431-226316913 | Colon_Crypt_1 | SE_23849 | chr1:226314482-226315331 | Colon_Crypt_2 | SE_23849 | chr1:226315334-226316161 | Colon_Crypt_2 | SE_23849 | chr1:226316204-226316855 | Colon_Crypt_2 | SE_24831 | chr1:226314416-226316628 | Colon_Crypt_3 | SE_26794 | chr1:226314386-226317368 | Esophagus | SE_31597 | chr1:226314394-226317203 | Gastric | SE_41844 | chr1:226314696-226315324 | LNCaP | SE_41844 | chr1:226315457-226316066 | LNCaP | SE_41844 | chr1:226316166-226316615 | LNCaP | SE_43265 | chr1:226314581-226317218 | Lung | SE_43763 | chr1:226314330-226317236 | MM1S | SE_47729 | chr1:226314790-226315311 | Pancreas | SE_47729 | chr1:226315339-226316040 | Pancreas | SE_47729 | chr1:226316205-226316603 | Pancreas | SE_50502 | chr1:226314371-226317219 | Sigmoid_Colon | SE_52861 | chr1:226314391-226316889 | Small_Intestine | SE_56941 | chr1:226314700-226316129 | VACO_400 | SE_56941 | chr1:226316193-226316621 | VACO_400 | SE_62016 | chr1:226296810-226321627 | Toledo | SE_63137 | chr1:226295246-226322063 | Tonsil | SE_65669 | chr1:226312586-226317084 | Pancreatic_islets | SE_67238 | chr1:226314330-226317236 | MM1S |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr1 | 226315055 | 226316024 | chr1 | 226316027 | 226316129 | chr1 | 226315631 | 226315825 | chr1 | 226315308 | 226315548 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I226126 | chr1 | 226314498 | 226317175 |
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Enhancer Sequence | CGCCGCGGCC AAGAAGACGC TGGAGGGAGG CTGTTAGGAG GGACTCTGAG CTTCACACCT 60 GTCTGCTGCC GTGGTTGCAG AGCCCTAGTC CTGATGGCCC CCGGTGGCAT ACATTGAATG 120 CCTAGGGCAG AAAGGAAGTG GGAATGGCGA AGATGTGACG TGCCTCGGTG TTAGATACTG 180 TTTCTTCTTA ACAAGTTGAG GCGTGGGTAG AGCAGGAACT GGTTTTCCAG CATTGTGTCC 240 GTAAACCTGA GTCAGAATAA GATGTAACAG AAGCCAGATA AAGACTCTGT CAAATCCTGC 300 AAAAAAAAAA AAAAGAAAAA AAAGAAAACA CACACACACA CACATGCACA CAATGCATAA 360 AGTGTTTCTG AAACTTTGGT GTGCATGAGA GACACCTGGG GACTTACAAA AACACAGATG 420 GCTGGCCCCA CCCTAGAGTT TCTAATTTAG TAGGTCCAGG GTGGGGTCCG GTAATTTGCA 480 TTTCTAACAA GTTTCCTGAT ACTGCTGCTG TTGCTCTTGG TTGGGGCCCA AACTTCCAGA 540 ACAACTGGTC TGAATGAAGG GCTGGGTCCG GGACCTGCAA GTCCCACTGT GCTGCTTGCC 600 CCGGTACCTC CTCCTAAGTC TGGCCCAGCA GGAAACGGAG CGCGGGTCAA AGTCCTCTCA 660 CAGTCAACCA GGAGAAACCT GTGTCTTCCT GGCAGGGTGG CTGGGTGCTA TGGAAACAAG 720 GCTCAGCCCA GAAGTGCCCA GCCTCCTTCC CAGAAGCAAC TTCAGCCTCT AGGGGAGGAG 780 TGAAGTGAAC AAACAAACGG AAGGGCAGAG CTCAGTTCCT GGATGGAAGC GGCACCTGCA 840 TGGAAGCGCC CTCAGCAACC TCAGGGCCCA GACTTCCGGG AAAGTCTCAC AGGGCCCCTG 900 GCTTGAGTTT TGGAGCTGGA AGGGAACTTT GCAATCTTGG TTCAACTTTT TGTTTTATTT 960 TCTGAGATGA ATCCTCGCTC TGTTGCCCAG GGTGGGGTGC AGTGGCGCAA TCTCGGCTCA 1020 CTGCAACCTC CGCCTCCCGG GTTCCAGCGA TGCTCCTGCC TCAGCCTCCT GAGTAGCTGG 1080 GATCACAGGT GCCTGCCACC ACGGTTGGCT AAATTTTGTA TTTTTAGTAG AGATGGGGGT 1140 TTCACCATGT TGGCCAGGCT GGTCTCGAAC TCCTTACCTC AGGTGATCCG CCCACCTCTG 1200 CCTTCCAAAG TGCTGGGATT ACAGGCATGA GCCACCGTGC CCGGCCCAGT ACATCTTTTA 1260 ACTGGGCTGT GAATGACACG ACTTGCTAAG ACCTGCCCAC TAAGAATGAG CTGCAGCCAG 1320 CACAATGTTG TCCGCTTCCA GCCACTTTCC TAGATACTCC TCCATTCCTC AGATTCCAGC 1380 CCCCACCCCA GCCTGGAACG CCCACAGTGC TTTTATCACA GCTCTTAACT CCACTTGGTT 1440 CCCCAAAGCT ATGAGCCCAC ATACCACCTC CCAGGGCTAC AACACTTTGG GTTTCTCAGA 1500 CACTGTCAAC ACTAAGCAGC ATGAACTGCA GGACACACAG GACAGCTGGA GAGGGGCAGT 1560 GAGTCACTGT GTCATAGTCC TGCCCAAATT CCAATGTTGA AATTGCAGAA GCCTGGGGCC 1620 CACCCTAGAG AATCTGATTC AGCAGGTTGG AGGGGGGGCC CAGGCACTGA TATTTTCAAG 1680 AGCCCTGGGT GATGTGGATG CCGATAGCAC TGGCTGCATG CTGAGAAACA CTGCCGATAG 1740 CATCATCTTC CACAGAAGGC 1760
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