Tag | Content |
---|
EnhancerAtlas ID | HS139-56805 |
Organism | Homo sapiens |
Tissue/cell | Myotube |
Coordinate | chr9:116343290-116344350 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr9:116344270-116344291 | CTCCACTTTCACTTTCACACT | + | 7.4 | PRDM1 | MA0508.2 | chr9:116344278-116344288 | TCACTTTCAC | + | 6.02 | TBXT | MA0009.2 | chr9:116343957-116343973 | TGACACCTCTGTGTGA | - | 6.26 | TBXT | MA0009.2 | chr9:116343957-116343973 | TGACACCTCTGTGTGA | + | 6.41 |
|
| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_01545 | chr9:116339593-116347114 | Aorta | SE_04603 | chr9:116339535-116345146 | Brain_Anterior_Caudate | SE_05014 | chr9:116339224-116345926 | Brain_Cingulate_Gyrus | SE_05863 | chr9:116339339-116348061 | Brain_Hippocampus_Middle | SE_08067 | chr9:116339510-116345768 | Brain_Inferior_Temporal_Lobe | SE_22487 | chr9:116338768-116345946 | CD8_primiary | SE_23144 | chr9:116340630-116344980 | Colon_Crypt_1 | SE_31479 | chr9:116339610-116345232 | Gastric | SE_34100 | chr9:116338798-116345722 | HCC1954 | SE_37366 | chr9:116339554-116344591 | HSMMtube | SE_38013 | chr9:116339540-116344636 | HUVEC | SE_40595 | chr9:116338679-116352631 | Left_Ventricle | SE_41925 | chr9:116340136-116344345 | LNCaP | SE_42114 | chr9:116339471-116346961 | Lung | SE_45799 | chr9:116339392-116344642 | Osteoblasts | SE_48560 | chr9:116339485-116344996 | Right_Atrium | SE_49479 | chr9:116340652-116344896 | Right_Ventricle | SE_50144 | chr9:116339457-116344975 | Sigmoid_Colon | SE_52410 | chr9:116339501-116345331 | Small_Intestine | SE_53357 | chr9:116339612-116345628 | Spleen | SE_54729 | chr9:116339611-116345903 | Stomach_Smooth_Muscle | SE_55765 | chr9:116339562-116344485 | u87 | SE_60923 | chr9:116336287-116346467 | DHL6 | SE_65476 | chr9:116340331-116345122 | Pancreatic_islets |
|
| Number: 1 | ID | Chromosome | Start | End |
GH09I113577 | chr9 | 116339359 | 116345647 |
|
Enhancer Sequence | TGGCTGGGCC AGGGGGTGGG TCGGGGGGAG GTCTGGCCAT GTGGTAGGGT GATAGGACTG 60 AGGGGCCCCA GGGAGCTGGC TGCAGGGCAG TTTGTTTCTC CTGATGGAGA ATGCTCCCTG 120 GTGGGTGGGG CGATGGGCTG GGGACTGGTT TGTTCATGGG GACAGAGATC AGAAGTGGGC 180 TTGAGAAGAA CAGGGCCAGA AGGCCTGGAC TCTGGCCCCA GCCTAGCCCC TAATTTGTGC 240 AGGGTGGCTT TGGGCAAGTC ACTAAGTCAC TGTCTAGACT GGGCCCTCAG CCTTCCTGTC 300 TACCCAATGG AGGGTCTTTC TGTCCACCTG GGAACAGCCT GATAGGACTG AAGCACAGCC 360 CTTAGTTTCC AGATGAGAAT TCTGGACTGG AGGCCCTGAC ATTACAATTG CCAACACTGA 420 CTCTGGTGTT TGGCAAAATT TGGTGTATGT GGGAAACACG TGCCTCTGGT TGAGGTCCTT 480 AACTTCAGAA TTTCCCTCTA GATCAATGCT TTTTAAAGCA CTAACTCCAA CACCACCATC 540 TTCTGTAGGA GCTTTCGAGC TTTCCAGCTT TTCCAGCATA CGCTCCTGAT CTGTTACTCA 600 GGCATGCTGG TTATCCCATT TCATACGTGG ACACCTTGAG GCCTAAAGGT TGGTGACTGG 660 CTCTACCTGA CACCTCTGTG TGATTCTAGG TTGCCCCTTG CTCCTCTCTG GGCCTCAGCC 720 TTTCTGTCTA TGCAGTGGGG ATTTCGGATC GCTGTTGTTT CAGAGTCTGA GGCTATGAGG 780 TCTGAGAGGG CCCTTGTGTG GAGTCACCTC TGAGCTGCAG GCAGGATTTC CAGGGCAAGA 840 AGGCCACAGC ATCAGCAGGC ACCTGTCTTT GGCCTGTGAG CCATAGCCTA AGGCGTGCCC 900 TTCCCGACCT TGGCCAGATC ACGCTAGAGT CCTCCAAGGC CTCCCCTCCC TTGCCCAGCC 960 ACCTTCTCTG CTCTGCAGGG CTCCACTTTC ACTTTCACAC TCCCAGGCTG TGGCTCTTAC 1020 CCGTGCCGAG CTTTCACATC CGCTCACATC TGTGCTCCCA 1060
|