EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS139-44962 
Organism
Homo sapiens 
Tissue/cell
Myotube 
Coordinate
chr5:140903800-140905600 
Target genes
Number: 41             
NameEnsembl ID
PCDHB5ENSG00000113209
PCDHB8ENSG00000120322
PCDHB16ENSG00000196963
PCDHB10ENSG00000120324
PCDHB13ENSG00000187372
PCDHB14ENSG00000120327
PCDHB15ENSG00000113248
SLC25A2ENSG00000120329
TAF7ENSG00000178913
AC005618.1ENSG00000255729
PCDHGA1ENSG00000204956
PCDHGA2ENSG00000081853
PCDHGA3ENSG00000254245
PCDHGB1ENSG00000254221
PCDHGA4ENSG00000262576
PCDHGB2ENSG00000253910
PCDHGA5ENSG00000253485
PCDHGB3ENSG00000262209
PCDHGA6ENSG00000253731
PCDHGA7ENSG00000253537
PCDHGB4ENSG00000253953
PCDHGA8ENSG00000253767
PCDHGA9ENSG00000261934
PCDHGB6ENSG00000253305
PCDHGA10ENSG00000253846
PCDHGB7ENSG00000254122
PCDHGA11ENSG00000253873
PCDHGB8PENSG00000248449
PCDHGA12ENSG00000253159
PCDHGC3ENSG00000240184
AC008781.1ENSG00000242020
PCDHGC4ENSG00000242419
PCDHGC5ENSG00000240764
CTDENSG00000246422
DIAPH1ENSG00000131504
HDAC3ENSG00000171720
RELL2ENSG00000164620
FCHSD1ENSG00000197948
ARAP3ENSG00000120318
AC005740.3ENSG00000226040
KIAA0141ENSG00000081791
TF binding sites/motifs
Number: 8             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CTCFMA0139.1chr5:140904456-140904475CAGCGCCACCTGCTGGCTG-7.95
Hnf4aMA0114.3chr5:140905448-140905464GGGGTTAAAGTCCGGC+6.14
RFX1MA0509.2chr5:140904359-140904375GGTTTCCATGACAACA-6.52
RFX1MA0509.2chr5:140904359-140904375GGTTTCCATGACAACA+6.54
RFX2MA0600.2chr5:140904359-140904375GGTTTCCATGACAACA-6.43
RFX2MA0600.2chr5:140904359-140904375GGTTTCCATGACAACA+6.56
RFX5MA0510.2chr5:140904359-140904375GGTTTCCATGACAACA+6.06
Twist2MA0633.1chr5:140905027-140905037ACCATATGTT+6.02
Number of super-enhancer constituents: 20             
IDCoordinateTissue/cell
SE_01329chr5:140904433-140905219Adrenal_Gland
SE_01882chr5:140903554-140905280Aorta
SE_02455chr5:140903654-140905877Astrocytes
SE_03479chr5:140903380-140904420Brain_Angular_Gyrus
SE_03479chr5:140904441-140905568Brain_Angular_Gyrus
SE_08893chr5:140903805-140904146Brain_Mid_Frontal_Lobe
SE_27199chr5:140904295-140905845Esophagus
SE_29634chr5:140903123-140906406Fetal_Muscle
SE_36096chr5:140898395-140905157HMEC
SE_37107chr5:140891203-140904950HSMMtube
SE_39102chr5:140903679-140906056IMR90
SE_42737chr5:140903372-140906032Lung
SE_45157chr5:140903585-140905921NHLF
SE_46154chr5:140898252-140906155Osteoblasts
SE_47017chr5:140904495-140905088Ovary
SE_51546chr5:140890736-140906117Skeletal_Muscle
SE_56626chr5:140903414-140905312u87
SE_58738chr5:140870606-140910872Ly1
SE_59948chr5:140883227-140905331Ly4
SE_60428chr5:140874228-140912009DHL6
Number: 1             
IDChromosomeStartEnd
GH05I141506chr5140886036140906054
Enhancer Sequence
TATAAAGAAC AAGATGGAGA TGTGAACTCT TCAGCCAGAG CAGCATGGCA AATATCAAGC 60
CCCACACAAA ATGAATGGCT ATTGCTTGAT TTCCCCTCTC CCACAGCAGC TGGCAGCTAA 120
GAAGAGGCAA AGAGAGCTCA GCCTTAAGTC TCACACGCTC ATGTTTACTT GTATCTGCTA 180
AAAAATGGTT AAAACAAAAG ATCTCATTGC CTATTATCCA ATGCAGACCT TGGGATATTT 240
TCCCGCAATG CCATCCTCCC CACCCCAATC AGGACTAGCA ACAAAATTAT ACAACTGCCC 300
AACTCCAAGA CCAGGATAAG TAGAGACTAC GATTGTGAAA TTACTAAGCA ACTATATCAC 360
TCCCTTTTAT CCTAAAGTGT TTTGCCTGGT TAGGTTTCAG AGCAGGGCCG AGGAAAGACC 420
ACTGATCAAA GAGTGCACTT TCCTGAAGTA CTGCCTCCAG TGGCTAAGTC TTCCTGATGT 480
CTAAGTCCTC TGCATCTAAG AGGAGCAGCC TGGCTGGAAT ACAAAGAGTT AATGTAGAAT 540
CCTTGTTCTA GCCTGGCTCG GTTTCCATGA CAACAGCTTA GGATAGTGAA ATCTGAAACT 600
GTGAAATCCC AAAAAGTCCA TAGGCTGCCA GATCCAAGGC TGGGGCTCAC TGCTCCCAGC 660
GCCACCTGCT GGCTGAGCAT CACCAGTGCA GCTGACCTAC ATTCCACCCT CATTTGCTTG 720
ACCCGGGTAC TGGAAACTGG GCAAGGTCCA TTACGCCACC TGTTGACCGT GTGCAGCCCT 780
CATCCCACAT GTCAGCGGGA CTCCACCTTC CCCCACTGCA TCCTAGCCAG TACCTGGGGA 840
CAAACCCTGG AGTCCCAGGG GAAGGTGAAG GATACTTGGT GTGGGCTTTA ATAGCATTAC 900
GAAGTTGTGG CTTACAACTA AGGGCAAGGA AATTGCTTTA CAGAAAAGTA TAAAAAGTCC 960
CTGGTAGCAA GAGGTATCAG AGCAGCCCTT GTGCCTGTGC TCTGTAAAAT ACTGATTCCT 1020
AACAAACTCA GCAGCTCTGT GAACACCTCT TCATTTGCAG AAGGTTTGTG GCCCCTCAGG 1080
TTTAGAGGAG GGTGGCATGG GCTCAGTGCT GTGTGAGCAG TGTATGCTGT ATTTCCGCTG 1140
CCCACAGAGA GAGCAGTGGG GGCGAAGGGG TAGGGAATCT GCAGCAAGAA AGAAGCAGAG 1200
ACAGGAAACA GAGGGCCAGT AATTGAAACC ATATGTTTCA ACAAAGACAT GCTTCTGGTA 1260
GTGAAACAGA GATTCTGCTG AAGAAAGAAG AGGGTGACCG GCTCCCCACC CGCTCCAAAA 1320
GTTCAATCCA TTTAAAATCT AATTGTGCAT ACAACTGTGC TAAGGTACTA GGGACATAGT 1380
ACTTTGTGAA ATAAGCAGAA AGGGAAGACA CGCCACAATT AAAAGATGGG AGGAGCGTCA 1440
GGAAAATATT TTACAGAAAA AAACCCGAAA GATTTAGTGG AGGGAATGAG AACAGGCCAG 1500
AGGAACCTTT GGATGGACAG AAGGAAAACA GTATATATCA CAGCAATACC ACAATCACAG 1560
GGGAATGAGA GAGAATGCAA GAGCGAGCAA AGGAGAGAAA AGGTAATAGT TTAACCAGGG 1620
CAAGTTGGAA TGCGCATGTA TCAGAATTGG GGTTAAAGTC CGGCATCAGG ATCTCGGAGT 1680
GAAGACTGCC AAAAATCATT TGCCAGGAGG TGAGCTCAGA CATGAGACTC TGCCTCTAGA 1740
CTCTAGGCAG AGAAGTCTTC CCAACATTCC TATCTCAGCC CATCAACCCG TCTTCACTCC 1800