EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-39985

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr4:3107160-3109010

Target genes

Number: 11
Name	Ensembl ID

TNIP2	ENSG00000168884
SH3BP2	ENSG00000087266
ADD1	ENSG00000087274
MFSD10	ENSG00000109736
NOP14	ENSG00000087269
HTT	ENSG00000197386
MSANTD1	ENSG00000188981
RGS12	ENSG00000159788
RP11	ENSG00000248843
DOK7	ENSG00000175920
LRPAP1	ENSG00000163956

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ALX3	MA0634.1	chr4:3108730-3108740	TCTAATTAAA	+	6.02
CTCF	MA0139.1	chr4:3108500-3108519	CTGCCACTAGAGGGCAGGG	+	6.61

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH04I003106

chr4

3107941

3110735

Enhancer Sequence

CAGGTAAGTT GTACACTCTG GATGTTGGTT TTTGTCGGGG GCCAGCTGCT ACTGATCCTT 60
TATGTCTCAG CTCAGATGTC ATTTCAAAAG TCTGCTCTGC CCTCTCCAAA TTGCAGTCGA 120
CCTTGCCCTG TTTATGTTTC CCTCATAGCA CTAATCCATG TCAGAAATTG TCACGTACAG 180
TCTATCTGTG TGCTTGTTTA TTTTCTATCC CACCCTTCCG CAAGAGACTT ATGGGATGTG 240
TGCCCCAGGA CAGCAGGGGT CTTACTGTCT TATGCTCTGT TGCAGCCCAG CAGCGATAAC 300
AGTGTCTGCA CATAGTACTT GCTTAAAAGA TACTTGCCAA ATTGTTGAAG GTTGAGGTAC 360
CAATTTCATT ATTGCTGACT ATAGGAGTTA TAGCAAAATA TCCATTTGTC TGTTACATGA 420
GTTAAAAATA TGGTTGTTGC ACTGTGAATA GTTTGGTTTA GTCAAAACAG TTGTATCTTA 480
ACGGATTGAG AAACAAAAGC AGGACCACTT TTCATCAGCT CCCTCCTTCT CCTTAACCAG 540
CAATACATGC TGATGCTGAT ATCCCATAGA CCCTCAGCTC CATCCTGAGT CACTGGGAAT 600
GTGGTCTAAA CCCTCACTAT TAATATGAAC TGAGTTTCAA TAAGAATCTT ATATGGGTCG 660
GGCATAGTGG CTCATACCTT TGATCCCAGC ACTTCAGGAG GCCAAGGCAG GTGGATTGCT 720
TGACCCAGAC TAGGCAACAT GGTGAAACGC CGCCTCTACA AAAAATACAA AACTTAGCCA 780
GGCATGGTGG TGCGTGCCTG TGGTCACAGC CACTCGAGAG GCTGAGGTGG GAGGATCACT 840
TGAGCCTGGG AGGTGGAGGT CGTGTTGAGC CAAGATCGCA CCACTGCACT CCAGCCTGGG 900
CAACAGAGTG AGACCTGTCT CAAAAAAACC AAAATCCAGA AAAGAACTTA TATGGCTGCA 960
GAGGTATAAT CACTAAGGAA ATTTCCTTTT GTATAATCTT TTTTCTTTTA CTATCATTTA 1020
AAAAAATGTG TTATATTTCT GAAGCAACAC ATCCAGGTTC TGCACATAGC AGCCAAAGTG 1080
ACCTTAAAGA ATATAACTGG GTCTTGTCAT TCCCTTATTT AAACTCTTGT ACCCATTTCC 1140
CAGTGCCGTT TAGATAGAGA TTCCAGACTC GTCAATGGCT CTGTCACCTC AGACACCCTG 1200
CATTGACTCA TTAGTCTGAT TAGAGTCAGG TTTTTCTTCC TCCTGATGGT TTTTTTTTCC 1260
CCCTTAGTTC TCAGCGGAAC AGTCACTTCC TTAGGGAGGT TTCCCCAGCC ACCCTCTGAG 1320
GCCGTGCTTG TTGCCAGACT CTGCCACTAG AGGGCAGGGC TGCACCACTC CTGGCACCTC 1380
GCACCCGGCC TGCCCTGTCA CTCTGTGTGT TGGGTGAATT CCTGTGATCT GTGACTCACT 1440
GCTCTGTGTC CTACACATTC GGCTTTTCTT CTCTCCCCAC AACCCCATTT TATAATTCTC 1500
CTTTTTCAGG AAAGCTTTAT TCCCATTTAA AAATTTTTGT TTTTAAAATG GTATTTTCTT 1560
ACACTTATTT TCTAATTAAA AATGAGTGTT TTAAGAAGTA TTATGATTTA CTGCAAATAA 1620
TTTTTAAACC CAGCCTTTTA GATCCTCTGT GATCATAAGA GAAATGAAGG ATGTCTCCCA 1680
ACACTTGAGC TTCATCCACA TTTCATCCTC CTGTTCTTTC AGCTGAGTTT TCCCCATCCC 1740
ATTAGGGACT GTTGGAATAT AAAACTGGCT TTTCCCTAAC AGGGAATGAA TTGCTTCTGT 1800
TTCTCCTGAA GGAGAGCTGG AAGAATGACT TGCGTTCTTT TGCATACACA 1850