EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-37154

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr3:49291720-49292820

Target genes

Number: 22
Name	Ensembl ID

UQCRC1	ENSG00000010256
IP6K2	ENSG00000068745
PRKAR2A	ENSG00000224424
SLC25A20	ENSG00000178537
ARIH2	ENSG00000177479
C3orf71	ENSG00000221883
RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
KLHDC8B	ENSG00000185909
RP11	ENSG00000225399
C3orf62	ENSG00000188315
GPX1	ENSG00000233276
NICN1	ENSG00000145029

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr3:49292678-49292696	GGAGGGAGGGAAGGAGAG	+	6.44
Nr2f6(var.2)	MA0728.1	chr3:49292280-49292295	GAGGTCAGAAGTTCA	+	6.38
RARA	MA0729.1	chr3:49292280-49292298	GAGGTCAGAAGTTCAAGA	+	6.88
RUNX1	MA0002.2	chr3:49292749-49292760	TTCTGTGGTTT	+	6.32
ZNF263	MA0528.1	chr3:49292675-49292696	CAAGGAGGGAGGGAAGGAGAG	+	6.51
Zfx	MA0146.2	chr3:49292256-49292270	GAGGCCGAGGCGGG	-	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I049255

chr3

49292643

49292870

Enhancer Sequence

AAATGTGTGT GTGTGTGTGT GCATGCAGAA TCTCACTGTG CAAAAGAGGA AAATCAATCA 60
GTCCTGATGT AGTTAGCACC TAGGTCCCCA AGTCTATTTG GGTCCAAGTG TAAGTATGGG 120
ATAAATAAGT GGAGGGCAAT AAATGATGGT AGGGCACATA CACGGTGCTA CCTGCAGAGA 180
GAAGCAACAC CCTAGCCGAG TGGAAATGGT ATTTTCTGAG GAGGTGACTG CTGAAAGTAG 240
AAGGAAGAAT AGGAATTAGC TGGACTAAGG TGGTGATTGG TTGCGGGGGG CGGGGGGAAT 300
GACAGGGACA GAAACAGGGT ACTTGAAGCT AAGGGAAGAC TTTGCACAAA GGCCAGTGGT 360
GAGAGAGAAA ACAAGAGTCC AGAGACATGG AGGAGGACAA ATGGGTAAAG GGAAGTGAGC 420
CCAGATCTTG TTAGCCAATT TAAAGATTTA GATTTTGTTC AGTGGCCAGT GGGGTGCCAT 480
CGAAAGTTTC AACGGGCTGG GCATGGTGGC TCACGCCTGT AATCCCAGCA CTTTGGGAGG 540
CCGAGGCGGG CAGATCACCG GAGGTCAGAA GTTCAAGACC AGCCTGGCCA ACATAGTGAA 600
ACCCCATCTC TACTAAAAAT ACAAAAATTA GCAGGGCATG GTGGCATGCG CATGTAATCC 660
CAGCTACTTA GGAGCTGAGG CAGGAGAATC GCTCAAACCT AGGAGGGGGA AGTTGCAGTG 720
AACCAAGATC GCATCACTGC ACTCCAGTCT GGGTGACAGA GCTAGTCTCC GTCTCAAAAA 780
AAAAAAAAGA AAAAAAGTTT CAATGAAGGT TTCAGAGGGT GCATTCTACT AAGATCACTC 840
TGATGAGAGG GCCAAGAAGG AAGGCCACAG AAGCTTTTGT GCTGTTGTCT GGGCAACTGA 900
TTCTCAGAGT CCCCAGCAGG TGCTGAGGTT GGGTCTGCCC TAGCCAGGAT CTTGTCAAGG 960
AGGGAGGGAA GGAGAGCCTG GAGGAACCAC TCCGGTCTGC ATCCAGCTCC TCCCTTTTCA 1020
CTGCTGTGGT TCTGTGGTTT GGGCAGATGG GACATACCAT ACATAGTCTT CAGGAGGTGA 1080
ACTGTCACTG TTTTGTATTT 1100