EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-26441

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr19:18964160-18965400

Target genes

Number: 21
Name	Ensembl ID

LSM4	ENSG00000130520
PGPEP1	ENSG00000130517
GDF15	ENSG00000130513
SSBP4	ENSG00000130511
ISYNA1	ENSG00000105655
ELL	ENSG00000105656
FKBP8	ENSG00000105701
KXD1	ENSG00000105700
UBA52	ENSG00000221983
C19orf60	ENSG00000006015
COMP	ENSG00000105664
UPF1	ENSG00000005007
GDF1	ENSG00000130283
CERS1	ENSG00000223802
COPE	ENSG00000105669
DDX49	ENSG00000105671
HOMER3	ENSG00000051128
AC005932.1	ENSG00000241172
SUGP2	ENSG00000064607
ARMC6	ENSG00000105676
SLC25A42	ENSG00000181035

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr19:18964174-18964185	AGAGGGTGTGG	-	6.02
Klf1	MA0493.1	chr19:18964176-18964187	AGGGTGTGGCC	-	6.32
Stat6	MA0520.1	chr19:18964959-18964974	GTTTCTGTGGAACTG	-	6.06

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2
Chromosome	Start	End

chr19	18964471	18964580
chr19	18965050	18965163

Enhancer Sequence

TATCCTTCAT GTGAAGAGGG TGTGGCCGGC TGGTGGGAGA GGAAAGTGGG GGCATCAGGT 60
GGAGGCCACT GTGGATTTGA TGCTCACTGC TGGGCCAGCA TCTCATGCTC TGTGGTGGGT 120
GCTGGTTGGC ATCGCCCTCC ACTGCTCTTA GGAGAATCAC AGGGCCTTCA CCTTCAGGGG 180
ACAGCTGGTT GTATGGTTGC TTCCCCTCTG CCCGAATGGT GATGTTGGTG ATGCCACTTG 240
TGTGGCGCGT CCCTGGGCTG ACTCTGGAAG TTAATGTATG CCGCTTGTGT GGCACGTCCC 300
TGGACTGACT CTGGAGGTTA ATGTGGCTGC AGGAGCGCCT TACCTGGACG CTGACTCTGC 360
ACACGGAGGT TCCAGAAGCC AGTGGTCACA TGCAGACCCT CTGAGCACAC ACTTGCTCCC 420
AGGCCATGTT TGGGAATGTG CAGTGACCTC ATGGTGATGC AGCCTGCCGG CCAGAGTGGG 480
GCAGCTGTAA GGCACAGGTG CAGTCAGAGG CTTGGGTGGG GAGGAGTCCT GGGAGAAGAC 540
ACCGCGGGTC AGACTCAGGC TGCCTCTTGG TGACTGGCCA ATGCTGCTGG GGCCTGACCA 600
TTCAGCGGTG GCCTCCACAG GGGTAGGGAG AGTTGTCTCC CACACCCACC CTGGGCCTGA 660
CAAGCTCATC CTGAACACGT GAGACCGGTT TTGGGGCTCG GGGTCGAGGG AAGGGTGTTG 720
CCTACCGGCC ACAGCCTCCT GGAGGGCAGT TTGCTTGTGT ATGTGGAGCC TTTTGCTTGG 780
CCGTACTGGG AGGGGTGTTG TTTCTGTGGA ACTGTGAGAA GAGCTGCTGT GGCCAAAGCT 840
GGGTTCTGCG AGCTCTGCCT GCCCCTGCTG GCCACATGTG CAGGAGCTCC CGGTGAGGTC 900
CTGGGGCCCA GGATGTGGCT GCTCCCTGCT GGTGAGCGCT GCTGGCTTCG CTGCCGCCCT 960
CTGCGTCTCT GAAAGGGGCC TAGATGGGTG GCTGGGAGTG GCAAGGAGGA ACTCCAGGCT 1020
GGCTGGGGGT GGGACACCGG CTCATGGTGA GGTAGAGTCT TTCTTCAAGG ATGCTGTCCT 1080
TCTGGTCTCT GGTCTGGTGT TGGCTGCACG TTTTTAGCGT TTGGTGCAGA GCCAGCGGTG 1140
TCTTAAGTAA CTAAATTTTA AAAACGCTGT TTAAAGAGCG TGTACCAAGG GTGGCCCAGA 1200
AAGGTCAGCC CGGCTTTTGA CAAGGATGCA AACTTAACTC 1240