EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-25704

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr19:1279240-1281150

Target genes

Number: 33
Name	Ensembl ID

WDR18	ENSG00000065268
RNF126	ENSG00000070423
FSTL3	ENSG00000070404
PALM	ENSG00000099864
ARID3A	ENSG00000116017
R3HDM4	ENSG00000198858
MED16	ENSG00000175221
PTBP1	ENSG00000011304
CFD	ENSG00000197766
C19orf6	ENSG00000182087
CNN2	ENSG00000064666
ABCA7	ENSG00000064687
HMHA1	ENSG00000180448
POLR2E	ENSG00000099817
GPX4	ENSG00000167468
SBNO2	ENSG00000064932
STK11	ENSG00000118046
C19orf26	ENSG00000099625
ATP5D	ENSG00000099624
MIDN	ENSG00000167470
CIRBP	ENSG00000099622
C19orf24	ENSG00000228300
MUM1	ENSG00000160953
EFNA2	ENSG00000099617
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
RPS15	ENSG00000115268
APC2	ENSG00000115266
C19orf25	ENSG00000119559
PCSK4	ENSG00000115257
ADAMTSL5	ENSG00000185761
MEX3D	ENSG00000181588
MBD3	ENSG00000071655

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr19:1279875-1279894	CTGCCACCAGGTGGCAGCC	+	7.44
RREB1	MA0073.1	chr19:1279277-1279297	AGTGTGGGGGTGGGTGGCGG	-	6.4

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I001279

chr19

1279576

1280154

Enhancer Sequence

CCATGCCACC TCTAGACCCG TGCGTACTGG TGCAGCCAGT GTGGGGGTGG GTGGCGGAGC 60
AGGGCTCAAG CCAGCCTCGG TTCCCCATCT GCGACCATGC TTGGGTTCTC CAGCCTTGCT 120
CCCAAGTAAG GAACCCATCT TCAGCTGCCT GGGATGAGGC CCTGCCTGTC AGCATCTCTC 180
TTCCTAGAGA GAACTCCTAT TCATCCGTCA AAGCCCCTGC CCCAGGGCCC CCTCTATGCC 240
ATCCCTTCAG CCTGGGTCTC ATGGGCCCTG CCCTGGAGGA TCCCCACATC ACCCTCATGA 300
ATACCTCTGG CAATGATTCC AGGGAGCCCC AGAGCTCTGC TGCAGGAGGC TGGAGTTCCG 360
TGCGGCCTGG GTCCCCATGC CGGACACTCC TCCCCCATCT GCCTCCTGTG GGACTTGGAG 420
CCTGAGACCC CATCCCAGGC AAGGTGCTTA ATCAGCTTCC CTGGGGCCTT GTTCTTCCTG 480
CAGGGGCCTG TGTCTGGGCG GAGTCCAGCC CTGGCCTGTC ATCCTGTCCC CCATGAGGTT 540
AGCCTTGGAG AGACCATGGT GCGTGGGTAC CCATGGCCTG AGGTCCCCCA CAGGCAACCT 600
GTCTGGAGCT GCCACTGCCC TGTCACGAGG AGGAGCTGCC ACCAGGTGGC AGCCTTGAGC 660
CGCCCAGTCC TCTGGCTGTC TCCTTGGTCC TAACCCTTCA TGTGGGAAAG CAAGTCCAGC 720
ACAGCCCATT TGTCACTCCA CTTCCTGAAC CCACCGTGTC CTCACATCCA CTGGGGGATG 780
GGCAGTCCCC CAGGTTTGCA TCTCACATAC CTGCCGACCC TCCCTGTCTG CCGCCAGGGT 840
TGGGAGGGGC TGTCTCCACT GGGGGCCAGG CTATCGCCCC TTCAGACCAG GGTCCCCTGT 900
CCTGGTACTA TCTGTTCCCT TGGGCATGTC CGTCTGACCA GGCCTGCCAA GACTCTGCTT 960
ACGTTTCTCC TTCCCCTTCC AGTGCCCTGG GTCCTTCTCT GCCCCAGCCT CAGCTGCCGC 1020
CTCCAGGAAG TCCTCCCTGA TTGCCCACCC CAGCCTGTTC TTTAGGGGAA TCCTGCAGGG 1080
AAGGTTGGGG AAGCAACCCT TAAAGTGAGG GCAGAGCCCG AGGGAGGCCC CTGAGACTGC 1140
AGGTGGGGAG GGCAGCTTGG CTCAGCCTGG CTGTGTGTGG GACTGGGGAC AAGCAAGTCA 1200
CACCTATGAC TCGGGCTCTG CTGTTCCCCA TCTGTCTGGC CGTTGCGTCT GTCTCCAAAC 1260
TCCCGTTTGC ATCTCTCCAT CTGCCTCCTT CACTTTGTCT CTGTCCGTCT CTGTCTCCAT 1320
GTCTGACCCT TTGGGACACA CTTTTAACAG GCACGGAGAC ACCAGCCCCG GCCCCCAACC 1380
CTGTGATCTG TGCCCCCCGT CCCACAGCTC TGAGCGCTTT CACCAGCTTC AAAAGGCACA 1440
TTAATTACTC TAATGAGGTC AGGAGAGACC CACGCTCTGC CATCCGGAGT CGGAACATGC 1500
CGCAGCCCCC AGCCCAGCCG CCGCCGCCCC CCGCTCGAGC AGGGAGAGGG GCTCTGCTGC 1560
CTCCGTCCCC TCTGCCTGTC GGGGCCCGTG CTGCACCCCA CGTTGCTGCA GAGTAATTGG 1620
CAGCCCCCCA AGGTTAATGC ACTGTTAGCC AGGGGTTCTC CTGGGCTCAG AGCCGGAGAG 1680
GGGCCTGTCA GCGAGAAATG AAAGGCCCCA GGTCCCGGCT GGTGCTCGGC TTGTGAGCGT 1740
GTGTGTGCCC GTGGGAGTGC GTGTGTGTGC GGGTGCCTGG GAGCTTGCGG GGGCGGGCAG 1800
TGGCTTCCTC CACCTCTCCC ACGCAGACAC GCAGACACGC AGGCACCCAC AAAATACAGT 1860
CTCATAGACA CACGGTAAGC AACTCGGACA GTTCCATGGA TGGGACGCCC 1910