| Tag | Content |
|---|
EnhancerAtlas ID | HS139-23029 |
Organism | Homo sapiens |
Tissue/cell | Myotube |
Coordinate | chr17:39956640-39958200 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr17:39958002-39958021 | TCCCGCCCCCTGGTGGCAG | - | 7.48 | | Foxa2 | MA0047.2 | chr17:39957853-39957865 | ACAAAGTAAACA | - | 6.18 | | KLF5 | MA0599.1 | chr17:39957111-39957121 | GGGGCGGGGC | - | 6.02 | | PLAG1 | MA0163.1 | chr17:39957529-39957543 | CCCCCTTTGCCCCC | - | 7.08 |
|
| | Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
| SE_23177 | chr17:39956502-39958045 | Colon_Crypt_1 | | SE_23845 | chr17:39956729-39957859 | Colon_Crypt_2 | | SE_24826 | chr17:39956827-39958000 | Colon_Crypt_3 | | SE_26576 | chr17:39954386-39958196 | Esophagus | | SE_27684 | chr17:39956419-39958391 | Fetal_Intestine | | SE_28604 | chr17:39955674-39958500 | Fetal_Intestine_Large | | SE_31640 | chr17:39956832-39958057 | Gastric | | SE_35990 | chr17:39955060-39958415 | HMEC | | SE_42558 | chr17:39956871-39958008 | Lung | | SE_50269 | chr17:39956747-39958247 | Sigmoid_Colon | | SE_52578 | chr17:39956556-39958197 | Small_Intestine | | SE_56909 | chr17:39956774-39958493 | VACO_400 | | SE_57643 | chr17:39957047-39957920 | VACO_503 | | SE_58007 | chr17:39956803-39957082 | VACO_9m | | SE_58007 | chr17:39957161-39957981 | VACO_9m | | SE_64699 | chr17:39955625-39958048 | NHEK |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr17 | 39956975 | 39957353 | | chr17 | 39956892 | 39957997 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I041798 | chr17 | 39955016 | 39958490 |
|
Enhancer Sequence | CAAAACAAAA CAGAACAAAA AAAAACCCCA AAAAATTAGC CAGGTGTGGT GGCAGGTGCC 60
TGTAATCCCA GCTACTTGGG AGGCTGAGGC AGAAAACAGC TTGAACCCAG GAGGCAGAGG 120
TTGTAGTGAG CTGAGATCAC GCTACTGCAC TCCAGCCTGG GCGACAGAGC AAGACTCTGT 180
CTCAAAAAAA AAAAAAGAAA AGAAAAAAAA AAACCACATT CATGCATGCA CGCAGGCAGG 240
CACACATTCA CACCCAGACC CGCACATTCA CGCAACACAC AAGCACACGG GCACTTTCAG 300
ACCCACACCC AGCCGTCCAG ATTCCAAAGC TTGTGCTCAT GGCAGGTTCA CGTCTGCGCA 360
GACACGCCAC AGCACATCCC GCTCCCCACC CTCTGAAGGG CCAGCCCCTC CCAGAAACAG 420
GGGCTGGGCC TTGGTGGACC TGACAACACT GCAGCTTGAA AGAGGTGGGG TGGGGCGGGG 480
CCACCCTGCA CCTGGAGGCG GTCAGGAAAC GCTACCACTG CAGATGTGCT TCCCCGGAAG 540
ACCCACCTAT GGGAGGAAGG AGTGAGGTCA CTGAGCCCCC AGCCTTGACC CAGCCCTTTT 600
TCCAGACTCA GACTCTGCCC TTTCAGCTCT CATCCCGATC AAAGGCCTAG GGGAGGGGCT 660
TGGAGTGGGA CAGGGAGTCC TCCTAGGAAC AGAGGTGGAC AGGGCCCAGG CCAGATCACC 720
TGGCACATCT GGAGAGAAAG TAGGGGTGGG GCAGTGAGAA CTTGGCTTCC CAGCCTTGAC 780
TCTACCTTCA AGTGGGAAGA CAACTCTGCC GCCCTGCCCC CGGGAGGCTG GAAATATGGG 840
GCAGAACTGT CACCTGGCTG GCCTTGGCCC TGGGTTCCTC CCAGACAGAC CCCCTTTGCC 900
CCCACCTCCC TGCTGTGGAA TAGGGGTGGG GTTTGGCGGT GAGTCCCAGG CTAGGAGGTA 960
GCCACCAGGC ACCATCGTTG CCTGCACACC CTGCACACCG GGACCCACTG CCCCTGGGAG 1020
CCCATGTAAA ATCGGTCAAG AGGGATCTGG CTGTCCCACT GCACCCCAAG AATCCCAAAG 1080
TAATCAAACC ACATCCCTGG GGCTCCTCTG CCTGCTAAGC TGGGGCCCCA ACCCGGCTCT 1140
GGAATGTGGG AATAGAGGGC AGCGGCAGGG CCAGCTCCCT CTGACTCTAA GGAAACTGGG 1200
TCAGTAAATG CCCACAAAGT AAACACTAGG AGCAAATGTC CTTGGCCCCC TCCCACACTT 1260
GCCACATTCC CCGAGGGAAG TGATCCTGAA CTAGGAAAAT ACAGGACTTC CCATCTTAGA 1320
AATCTGAAAC CATCGTCTTC CCGCCTGGGG AGGACTGTGT TCTCCCGCCC CCTGGTGGCA 1380
GATCTGCACA CTGCGTCCTC TCTCACACAT CCTTCAGCCC CAGGTGCAGA GGACCAGCCA 1440
GGGCCCAGAT GGTGCCCCTC CGCCCCACAT TTTACAGATG AGGGGACACA GGTGCGGAGA 1500
GAGGGAGGGA AGGACCTGTA CCCTTACAAC TGAGCTCCAG GGAGACGACC ACGGGTACTA 1560
|
