Tag | Content |
---|
EnhancerAtlas ID | HS139-22673 |
Organism | Homo sapiens |
Tissue/cell | Myotube |
Coordinate | chr17:27443470-27445060 |
Target genes | Number: 15 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr17:27444328-27444347 | TGCTGCCCCCTAGTGGCCG | - | 8.71 | RARA(var.2) | MA0730.1 | chr17:27445014-27445031 | AGGTCACCCAGGGGACA | + | 6.25 | RREB1 | MA0073.1 | chr17:27443744-27443764 | CCCCCCCCCCCCCCCCCCCG | + | 6.07 | RREB1 | MA0073.1 | chr17:27443743-27443763 | CCCCCCCCCCCCCCCCCCCC | + | 6.38 | ZNF263 | MA0528.1 | chr17:27443742-27443763 | TCCCCCCCCCCCCCCCCCCCC | - | 6.05 | ZNF263 | MA0528.1 | chr17:27443739-27443760 | CCCTCCCCCCCCCCCCCCCCC | - | 6.13 | ZNF740 | MA0753.2 | chr17:27443743-27443756 | CCCCCCCCCCCCC | + | 6.03 | ZNF740 | MA0753.2 | chr17:27443744-27443757 | CCCCCCCCCCCCC | + | 6.03 | ZNF740 | MA0753.2 | chr17:27443745-27443758 | CCCCCCCCCCCCC | + | 6.03 | ZNF740 | MA0753.2 | chr17:27443746-27443759 | CCCCCCCCCCCCC | + | 6.03 | ZNF740 | MA0753.2 | chr17:27443747-27443760 | CCCCCCCCCCCCC | + | 6.03 | ZNF740 | MA0753.2 | chr17:27443748-27443761 | CCCCCCCCCCCCC | + | 6.03 | ZNF740 | MA0753.2 | chr17:27443749-27443762 | CCCCCCCCCCCCC | + | 6.03 | ZNF740 | MA0753.2 | chr17:27443750-27443763 | CCCCCCCCCCCCC | + | 6.03 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_03910 | chr17:27442751-27443719 | Brain_Anterior_Caudate | SE_03910 | chr17:27443731-27444460 | Brain_Anterior_Caudate | SE_04884 | chr17:27442252-27444668 | Brain_Cingulate_Gyrus | SE_05843 | chr17:27438017-27445637 | Brain_Hippocampus_Middle | SE_07806 | chr17:27442233-27444824 | Brain_Inferior_Temporal_Lobe | SE_09987 | chr17:27440483-27444430 | CD14 | SE_37582 | chr17:27444742-27446888 | HSMMtube | SE_48211 | chr17:27437653-27443740 | Psoas_Muscle | SE_65361 | chr17:27443733-27445146 | Pancreatic_islets | SE_68762 | chr17:27441704-27443641 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I029115 | chr17 | 27442561 | 27444767 |
|
Enhancer Sequence | CTTCTGTAAG GCAAAGGACC AGCATGCAGC ATGCAAAGAA AAACAGTGTG TTAGCAAACA 60 GTCATCAATA GAGCTCGCCG CCTCGGAGGG ACCGTGGGGC GGGGGTGTTG TGAGGATGAG 120 TAGGCAAGAA AACACAACCA CAGTCAGACT TGGGACAAAC GCACACACAC ACAGTCTCCA 180 GGGAGTATGT TTGTGGGTGT AATCACACTG ACACACACAG AAAGAGACCC GCAAAGACAT 240 TTGTGCACAT GTGTGTGTGC GCAAACACAC CCTCCCCCCC CCCCCCCCCC CCCGCCGGAA 300 AACACTGGAA GCTCTGAGGC GCTAACAGAC ATTGTTTGAG AAGATCGCTG TGCTGACACC 360 CGGAGCTTTC CGCTTGCAGT TGGGGCTGGG TAGGTTAGAG GAAAGCTAGG CTTGTCACCG 420 CCTCAGAGTG AAGTAACTTC CCTCAACACA CAGCCACACG CCTGCCCGCC TGTCTGTCCT 480 CCACATTCTC GAGAAAACTT CTCTAACCTA GAGCCTGGCT CCTCCTGGGC AGGGATGCCA 540 CTTCTTGGGG TCGCTCGCAT GGAGCCTCAC GCCTGGGCAC CCATTCCTCC ATACACCCAC 600 CACCTGCCAG GACTTTCTCA CTCCAGCTGA GCAGCCTGGG GCCCTTCACA TCCCAGAAGG 660 GGCCAAAGCC AAAGCCCAAG GTGCTGTTCA GCGCCAGCAT CCCCTTTCCC TAAACTGGAG 720 AAAAAGGGGG TGAAGAGGTG CTCGAATCGC CATCCTCCAA CGTAAGTCAT CTTGAAGGAT 780 GGAGCAGAGC TCCTCCAAGC CAGGCCAAGT CCCCGAGCGC AAGTGCCAAA GCTGCAGCCC 840 ATTCGTTACC ACGGTGCCTG CTGCCCCCTA GTGGCCGCCA CCCTGACATG CAAGAGGAAG 900 ATACGGAGCT ACCCAACCAG TGGAGAAGGG AAGAGGACTG GGGAAAACTG GTCTGGGGAG 960 GCCCCAGGTA GCAAGCCCAC CCTACCCCAC CCCACGGTGG GCATCCTGAG AGGTTCCAGG 1020 ATTCAGATCT AAAACTGGCA GGAGAAGCAG CTACTCCTGG GACTCTAAGA CACCCCACAG 1080 CCTGCAGGCT CCACTTCCAC TCTCAACCTC CAGGCTTCTC CCCAGACCAG TCCTCTCTGC 1140 AGCAACAGAA CAAGCCCAGC CCCTAGAAAG TCCTGGGCAA GCACCAAGAC AGGGCACGGC 1200 GGCCCCTATA CCCAAGGGCG GGGCCAAGGT CAGTTACCCG CTTGCTCCTC GGGGGCCTCT 1260 GTCAGGAAGG GAACAAGAAG GAGAGTTATT CCAGCGGGGC TGCCCTGCCT TAGTGCCCTT 1320 CTCATCCCTC AGCCTCTGAA CCCCCAGCCC TCCATGCTTC CTCATGGTGC CCCCCAGCAC 1380 AGCCAGCTAA GTCCAGGCCT CGGGTCGTCA CTGCCAAAGA TGCTTCCCGG GCCTTCTGCT 1440 CTGAAGTGGG GGGCTGAGAA GAGGCACAAG CAAAAGAGGG TTGTCTCAGA ACGGCTAAGT 1500 CTGTGCTGGG CAAGAATAAA CTGGGAGTGG GCAGGGTCCC TGTGAGGTCA CCCAGGGGAC 1560 AGGCCAGCCT ACTGGGACCC ACTGCAGGTT 1590
|