| CTCF | MA0139.1 | chr12:127651079-127651098 | TTGTGTCACCTGCTGGCAA | - | 6.21 |
| DUX4 | MA0468.1 | chr12:127661913-127661924 | TAATCTAATCA | + | 6.32 |
| GSC | MA0648.1 | chr12:127657587-127657597 | GCTAATCCCC | + | 6.02 |
| IRF1 | MA0050.2 | chr12:127645883-127645904 | GTGTACTTTCATTTTCAATAA | + | 6.41 |
| IRF1 | MA0050.2 | chr12:127645494-127645515 | AAAATGAAAGTGGAAAAAAAA | - | 6 |
| IRF1 | MA0050.2 | chr12:127645488-127645509 | AGACTGAAAATGAAAGTGGAA | - | 7.66 |
| KLF5 | MA0599.1 | chr12:127650673-127650683 | GGGGCGGGGC | - | 6.02 |
| LHX2 | MA0700.1 | chr12:127659239-127659249 | ACTAATTAAC | + | 6.02 |
| Nr2f6(var.2) | MA0728.1 | chr12:127649874-127649889 | GAGGTCAGGAGTTCA | + | 6.22 |
| Nr2f6(var.2) | MA0728.1 | chr12:127652481-127652496 | GAGGTCAGGAGTTCA | + | 6.22 |
| Nr2f6(var.2) | MA0728.1 | chr12:127651613-127651628 | TGAACTCCTGACCTC | - | 6.22 |
| PAX6 | MA0069.1 | chr12:127648938-127648952 | AATTAATGCGTGAA | - | 6.28 |
| SOX10 | MA0442.2 | chr12:127646599-127646610 | AAAACAAAGCA | + | 6.02 |
| SOX10 | MA0442.2 | chr12:127653719-127653730 | TTCTTTGTTTT | - | 6.62 |
| SPIC | MA0687.1 | chr12:127655341-127655355 | GGAAAGAGGAAGTC | + | 6.14 |
| ZNF263 | MA0528.1 | chr12:127651939-127651960 | GGTGGAAGAAGGAAGGGGAGA | + | 6.31 |
| ZNF263 | MA0528.1 | chr12:127650320-127650341 | GGAGGAGAAAGTGGAGGAAGC | + | 6.73 |
| ZNF263 | MA0528.1 | chr12:127658644-127658665 | GGAGGAAGAGAGTGAAGGGGG | + | 6.87 |
| ZNF263 | MA0528.1 | chr12:127658641-127658662 | GAAGGAGGAAGAGAGTGAAGG | + | 7.66 |
| ZNF263 | MA0528.1 | chr12:127650317-127650338 | GGAGGAGGAGAAAGTGGAGGA | + | 8.59 |
| Zfx | MA0146.2 | chr12:127654094-127654108 | GAGGCCGAGGCGGG | - | 6.01 |
| Zfx | MA0146.2 | chr12:127660484-127660498 | GAGGCCGAGGCGGG | - | 6.01 |
| mix-a | MA0621.1 | chr12:127659239-127659250 | ACTAATTAACT | - | 6.14 |
