| CTCF | MA0139.1 | chr12:125139125-125139144 | TAACCACCAGGGGCCACTG | + | 6.04 |
| ESRRB | MA0141.3 | chr12:125147373-125147384 | TATGACCTTGA | - | 6.62 |
| EWSR1-FLI1 | MA0149.1 | chr12:125142722-125142740 | GGAAGTGAGGCAGGCAGG | + | 6.43 |
| EWSR1-FLI1 | MA0149.1 | chr12:125142734-125142752 | GGCAGGAATGACGGAAGG | + | 6.56 |
| EWSR1-FLI1 | MA0149.1 | chr12:125142742-125142760 | TGACGGAAGGAAGGAAGA | + | 6.78 |
| EWSR1-FLI1 | MA0149.1 | chr12:125148327-125148345 | GGAAGGAAGAAAGGAAAA | + | 7.54 |
| EWSR1-FLI1 | MA0149.1 | chr12:125142738-125142756 | GGAATGACGGAAGGAAGG | + | 7.79 |
| Esrra | MA0592.2 | chr12:125147374-125147385 | ATGACCTTGAA | - | 6.62 |
| Esrrg | MA0643.1 | chr12:125147374-125147384 | ATGACCTTGA | - | 6.02 |
| FOXP1 | MA0481.2 | chr12:125154563-125154575 | ATGTAAACAGAC | + | 6.44 |
| FOXP2 | MA0593.1 | chr12:125154563-125154574 | ATGTAAACAGA | + | 6.02 |
| Foxd3 | MA0041.1 | chr12:125154428-125154440 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr12:125134634-125134646 | AAACAAACAAAC | - | 6.32 |
| Foxd3 | MA0041.1 | chr12:125134638-125134650 | AAACAAACAAAC | - | 6.32 |
| IRF1 | MA0050.2 | chr12:125134621-125134642 | AAAACAAAAATGAAAACAAAC | - | 6.03 |
| IRF1 | MA0050.2 | chr12:125142113-125142134 | TTTTTCTTTCTTTTTTGTTTT | + | 6.46 |
| KLF4 | MA0039.3 | chr12:125148776-125148787 | GGAGGGTGTGG | - | 6.32 |
| Myog | MA0500.1 | chr12:125137494-125137505 | CAGCAGCTGTC | - | 6.14 |
| NKX2-5 | MA0063.2 | chr12:125152884-125152894 | ACCACTTGAG | + | 6.02 |
| NR2C2 | MA0504.1 | chr12:125141076-125141091 | CAACCTCTGACCCCC | - | 6.05 |
| NR2C2 | MA0504.1 | chr12:125144089-125144104 | TGACCCCTCACCTCT | - | 6.26 |
| Nr2f6 | MA0677.1 | chr12:125146574-125146588 | TAGGTCAAGGGTCA | + | 6.42 |
| ONECUT3 | MA0757.1 | chr12:125134872-125134886 | TAAAAATCAATAGT | + | 6.09 |
| PRDM1 | MA0508.2 | chr12:125152612-125152622 | GTGAAAGTGA | - | 6.02 |
| Pou2f3 | MA0627.1 | chr12:125134853-125134869 | ATTAATTTGCATAGGA | - | 6.21 |
| Rxra | MA0512.2 | chr12:125146574-125146588 | TAGGTCAAGGGTCA | + | 6.15 |
| TFAP2A | MA0003.3 | chr12:125134814-125134825 | TGCCTGAGGCA | - | 6.02 |
| Tcf12 | MA0521.1 | chr12:125137494-125137505 | CAGCAGCTGTC | - | 6.02 |
| USF1 | MA0093.2 | chr12:125153354-125153365 | GCCACGTGACC | + | 6.62 |
| USF2 | MA0526.2 | chr12:125153352-125153368 | AAGCCACGTGACCACA | - | 6.5 |
| ZNF143 | MA0088.2 | chr12:125143146-125143162 | CAGGGCATCGTGGGTT | - | 6.13 |
| ZNF263 | MA0528.1 | chr12:125143082-125143103 | GGGAGAGGGAGAGGAGGGGGC | + | 6.06 |
| ZNF263 | MA0528.1 | chr12:125143080-125143101 | GAGGGAGAGGGAGAGGAGGGG | + | 6.13 |
| ZNF740 | MA0753.2 | chr12:125132631-125132644 | CCCCCCCCCCCAC | + | 6.92 |
