| CTCF | MA0139.1 | chr12:123528163-123528182 | CGGCCACCTGGGGGCACCG | + | 6.57 |
| DMRT3 | MA0610.1 | chr12:123525156-123525167 | ATTGATACATT | - | 6.62 |
| EN2 | MA0642.1 | chr12:123552509-123552519 | CCCAATTAGC | + | 6.02 |
| ESRRB | MA0141.3 | chr12:123521501-123521512 | TCAAGGTCAAT | + | 6.02 |
| Esrra | MA0592.2 | chr12:123521500-123521511 | TTCAAGGTCAA | + | 6.14 |
| Esrra | MA0592.2 | chr12:123548819-123548830 | GTCAAGGTCAT | + | 6.32 |
| Esrrg | MA0643.1 | chr12:123548820-123548830 | TCAAGGTCAT | + | 6.02 |
| FOS | MA0476.1 | chr12:123540715-123540726 | GATGAGTCACA | - | 6.14 |
| FOS | MA0476.1 | chr12:123547519-123547530 | GATGAGTCACA | - | 6.14 |
| Foxd3 | MA0041.1 | chr12:123536812-123536824 | GTTTGTTTGTTT | + | 6.32 |
| Gfi1b | MA0483.1 | chr12:123529088-123529099 | TGCTGAGATTT | - | 6.32 |
| HNF4G | MA0484.1 | chr12:123554021-123554036 | AAAGGCCAGAGTCCA | + | 6.08 |
| HSF1 | MA0486.2 | chr12:123543358-123543371 | GAAAATTCTCGAA | - | 6 |
| JUN(var.2) | MA0489.1 | chr12:123547515-123547529 | AAGAGATGAGTCAC | + | 6.17 |
| JUND | MA0491.1 | chr12:123540715-123540726 | GATGAGTCACA | - | 6.14 |
| JUND | MA0491.1 | chr12:123547519-123547530 | GATGAGTCACA | - | 6.14 |
| Lhx3 | MA0135.1 | chr12:123537813-123537826 | AATAAATTAATTT | - | 6 |
| MEF2A | MA0052.3 | chr12:123547230-123547242 | ACTATAAATAGC | + | 6.11 |
| MEF2A | MA0052.3 | chr12:123547251-123547263 | ACTATAAATAGC | + | 6.11 |
| MEF2B | MA0660.1 | chr12:123547230-123547242 | ACTATAAATAGC | + | 6.74 |
| MEF2B | MA0660.1 | chr12:123547251-123547263 | ACTATAAATAGC | + | 6.74 |
| Mecom | MA0029.1 | chr12:123519825-123519839 | GAGACAAGATAAGC | + | 6.48 |
| Mecom | MA0029.1 | chr12:123521192-123521206 | TAGATAAGATAACC | + | 6.65 |
| Myod1 | MA0499.1 | chr12:123534088-123534101 | GGGAACAGCTGCT | - | 6.92 |
| NFKB1 | MA0105.4 | chr12:123521391-123521404 | AGGGGCTTCCCCT | - | 6.02 |
| NR2C2 | MA0504.1 | chr12:123543625-123543640 | TGGGGGCAGAGGTCA | + | 6.77 |
| Nr2f6(var.2) | MA0728.1 | chr12:123536692-123536707 | TGAACTCCTGACCTC | - | 6.22 |
| ONECUT1 | MA0679.1 | chr12:123524960-123524974 | AAAAAATCAATAAT | + | 7.64 |
| ONECUT2 | MA0756.1 | chr12:123524960-123524974 | AAAAAATCAATAAT | + | 7.95 |
| ONECUT3 | MA0757.1 | chr12:123524960-123524974 | AAAAAATCAATAAT | + | 8.42 |
| RREB1 | MA0073.1 | chr12:123559170-123559190 | CACCCACCCACACACACACA | + | 6.06 |
| RREB1 | MA0073.1 | chr12:123559166-123559186 | CACCCACCCACCCACACACA | + | 7.19 |
| SRF | MA0083.3 | chr12:123551586-123551602 | TGACCTTATTTGGAAA | - | 6.01 |
| TBX2 | MA0688.1 | chr12:123521696-123521707 | GAGGTGTGAAA | + | 6.14 |
| TCF3 | MA0522.2 | chr12:123542840-123542850 | AACACCTGCT | + | 6.02 |
| TCF7L2 | MA0523.1 | chr12:123525674-123525688 | ATCCTTTGATCTTT | - | 6.93 |
| TFAP2A | MA0003.3 | chr12:123543229-123543240 | TGCCTGAGGCA | - | 6.02 |
| TFAP2A | MA0003.3 | chr12:123543280-123543291 | TGCCTGAGGCA | - | 6.02 |
| TFAP2C | MA0524.2 | chr12:123542204-123542216 | AGCCCCAGGGCA | + | 6.11 |
| ZNF143 | MA0088.2 | chr12:123550923-123550939 | CTGAGCATTGTGGGTA | - | 6.18 |
| ZNF263 | MA0528.1 | chr12:123552631-123552652 | CTCCCCACTTTCTCCACCTCC | - | 6.08 |
| ZNF263 | MA0528.1 | chr12:123546584-123546605 | TCCTCCTCCTCCTTCTCCCTG | - | 6.1 |
| ZNF263 | MA0528.1 | chr12:123530691-123530712 | TGAGGAGGAGGGTGTAGGAGA | + | 6.41 |
| ZNF263 | MA0528.1 | chr12:123530694-123530715 | GGAGGAGGGTGTAGGAGAAAA | + | 6.41 |
| ZNF263 | MA0528.1 | chr12:123546578-123546599 | CCCTGCTCCTCCTCCTCCTTC | - | 6.49 |
| ZNF263 | MA0528.1 | chr12:123546575-123546596 | GGCCCCTGCTCCTCCTCCTCC | - | 6.58 |
| ZNF263 | MA0528.1 | chr12:123546581-123546602 | TGCTCCTCCTCCTCCTTCTCC | - | 7.48 |
| ZNF410 | MA0752.1 | chr12:123520977-123520994 | TGGCATTATGGGATGCC | - | 6.14 |
| Zfx | MA0146.2 | chr12:123533202-123533216 | CCCGCCTCGGCCTC | + | 6.01 |
| Zfx | MA0146.2 | chr12:123541687-123541701 | GAGGCCGAGGCGGG | - | 6.01 |
| Znf423 | MA0116.1 | chr12:123545327-123545342 | ACCACCTAAGGGGGC | + | 6.07 |
| Znf423 | MA0116.1 | chr12:123542781-123542796 | GCCACCATGGGGTCC | - | 6.1 |
