| CTCF | MA0139.1 | chr12:109006087-109006106 | CTGCCCCCAGGGGGCGGTA | + | 6.37 |
| CTCF | MA0139.1 | chr12:109012058-109012077 | GGGCGCCCCCTGGTGGCCG | - | 9 |
| ESR1 | MA0112.3 | chr12:109014492-109014509 | GAGGTCAGGGTGAGCTT | + | 6.15 |
| EWSR1-FLI1 | MA0149.1 | chr12:109010893-109010911 | CCTGTCTACCCTCCTTCC | - | 6.01 |
| EWSR1-FLI1 | MA0149.1 | chr12:109000907-109000925 | CCCTCCCTCCCCCCTTCC | - | 6.17 |
| EWSR1-FLI1 | MA0149.1 | chr12:109000877-109000895 | TTCTCCTTCCTTCCCTCC | - | 6.45 |
| EWSR1-FLI1 | MA0149.1 | chr12:109000885-109000903 | CCTTCCCTCCTCCCATCC | - | 6.62 |
| EWSR1-FLI1 | MA0149.1 | chr12:109010901-109010919 | CCCTCCTTCCTTCCCTGC | - | 6.86 |
| EWSR1-FLI1 | MA0149.1 | chr12:109010897-109010915 | TCTACCCTCCTTCCTTCC | - | 7.18 |
| EWSR1-FLI1 | MA0149.1 | chr12:109000919-109000937 | CCTTCCTCCCATCCTTCC | - | 8.1 |
| EWSR1-FLI1 | MA0149.1 | chr12:109000881-109000899 | CCTTCCTTCCCTCCTCCC | - | 8.45 |
| Esrra | MA0592.2 | chr12:109002761-109002772 | ATGACCTTGAG | - | 6.02 |
| Esrrg | MA0643.1 | chr12:109002761-109002771 | ATGACCTTGA | - | 6.02 |
| FOS | MA0476.1 | chr12:109005958-109005969 | GATGAGTCACA | - | 6.14 |
| Foxd3 | MA0041.1 | chr12:109002424-109002436 | AAACAAACAAAC | - | 6.32 |
| GFI1 | MA0038.2 | chr12:109015292-109015304 | TGCAGTGATTGA | - | 6.18 |
| IRF1 | MA0050.2 | chr12:109001323-109001344 | AAAGAAAAAGAAAAAGAAAAT | - | 6.01 |
| IRF1 | MA0050.2 | chr12:109001311-109001332 | AAAAAAAAAGAAAAAGAAAAA | - | 6.09 |
| IRF1 | MA0050.2 | chr12:109001317-109001338 | AAAGAAAAAGAAAAAGAAAAA | - | 6.17 |
| JUND | MA0491.1 | chr12:109005958-109005969 | GATGAGTCACA | - | 6.14 |
| NFYB | MA0502.1 | chr12:109013788-109013803 | AACCTGACCAATCAG | + | 6.72 |
| Nfe2l2 | MA0150.2 | chr12:109005822-109005837 | TGCTGAATCATGTTT | - | 6.04 |
| Nkx3-2 | MA0122.3 | chr12:108999980-108999993 | GTTAAGTGGTTAA | - | 6.62 |
| Nr2f6(var.2) | MA0728.1 | chr12:109015586-109015601 | TGAACTCCTGACCTC | - | 6.22 |
| PLAG1 | MA0163.1 | chr12:109003421-109003435 | GGGGCTCAAGGGTG | + | 6.13 |
| POU2F2 | MA0507.1 | chr12:109009935-109009948 | TTAATTTGCATTT | + | 6.25 |
| RREB1 | MA0073.1 | chr12:109000093-109000113 | GGTTAGTGGTTGTTTGGCGG | - | 6.35 |
| RREB1 | MA0073.1 | chr12:109000082-109000102 | GGTAGGTGGGTGGTTAGTGG | - | 6.56 |
| SREBF1 | MA0595.1 | chr12:109011579-109011589 | GTGGGGTGAT | - | 6.02 |
| TEAD1 | MA0090.2 | chr12:109010712-109010722 | CACATTCCAT | + | 6.02 |
| ZIC1 | MA0696.1 | chr12:109012291-109012305 | AGCCCCCTGCTGTG | + | 6.01 |
| ZNF263 | MA0528.1 | chr12:109000895-109000916 | TCCCATCCTCCCCCCTCCCTC | - | 6.02 |
| ZNF263 | MA0528.1 | chr12:109000802-109000823 | TCCCCTCCGCTCCCTTCCTCC | - | 6.06 |
| ZNF263 | MA0528.1 | chr12:109000858-109000879 | TTCTCTTCCCTTCCCTCCCTT | - | 6.3 |
| ZNF263 | MA0528.1 | chr12:109000939-109000960 | TCCCTCCTCCCCTCCTCTTTC | - | 6.41 |
| ZNF263 | MA0528.1 | chr12:109000899-109000920 | ATCCTCCCCCCTCCCTCCCCC | - | 6.42 |
| ZNF263 | MA0528.1 | chr12:109000742-109000763 | TTCTCCTGCTCTCCCTCCACT | - | 6.49 |
| ZNF263 | MA0528.1 | chr12:109000924-109000945 | CTCCCATCCTTCCCCTCCCTC | - | 6.58 |
| ZNF263 | MA0528.1 | chr12:109000869-109000890 | TCCCTCCCTTCTCCTTCCTTC | - | 6.78 |
| ZNF263 | MA0528.1 | chr12:109000862-109000883 | CTTCCCTTCCCTCCCTTCTCC | - | 7.05 |
| ZNF263 | MA0528.1 | chr12:109000888-109000909 | TCCCTCCTCCCATCCTCCCCC | - | 7.11 |
| ZNF263 | MA0528.1 | chr12:109000915-109000936 | CCCCCCTTCCTCCCATCCTTC | - | 7.23 |
| ZNF263 | MA0528.1 | chr12:109000865-109000886 | CCCTTCCCTCCCTTCTCCTTC | - | 7.27 |
| ZNF263 | MA0528.1 | chr12:109000885-109000906 | CCTTCCCTCCTCCCATCCTCC | - | 7.31 |
| ZNF263 | MA0528.1 | chr12:109000928-109000949 | CATCCTTCCCCTCCCTCCTCC | - | 7.41 |
| ZNF263 | MA0528.1 | chr12:109000931-109000952 | CCTTCCCCTCCCTCCTCCCCT | - | 7.67 |
| ZNF263 | MA0528.1 | chr12:109000936-109000957 | CCCTCCCTCCTCCCCTCCTCT | - | 7.9 |
| ZNF263 | MA0528.1 | chr12:109000907-109000928 | CCCTCCCTCCCCCCTTCCTCC | - | 8.36 |
| ZNF263 | MA0528.1 | chr12:109000877-109000898 | TTCTCCTTCCTTCCCTCCTCC | - | 8.59 |
