| EWSR1-FLI1 | MA0149.1 | chr12:105000133-105000151 | GGTCGGAAGGAAAGAAGG | + | 6.47 |
| EWSR1-FLI1 | MA0149.1 | chr12:105000125-105000143 | AGAAGGAAGGTCGGAAGG | + | 6.51 |
| EWSR1-FLI1 | MA0149.1 | chr12:105000137-105000155 | GGAAGGAAAGAAGGATGA | + | 7.02 |
| EWSR1-FLI1 | MA0149.1 | chr12:105000129-105000147 | GGAAGGTCGGAAGGAAAG | + | 7 |
| FOSL1 | MA0477.1 | chr12:104998079-104998090 | GATGAGTCACC | - | 6.32 |
| HES2 | MA0616.2 | chr12:105006868-105006878 | GGCACGTGCC | + | 6.02 |
| HES2 | MA0616.2 | chr12:105006868-105006878 | GGCACGTGCC | - | 6.02 |
| HOXA13 | MA0650.2 | chr12:104999122-104999133 | ACCAATAAAAC | + | 6.32 |
| IRF1 | MA0050.2 | chr12:105002054-105002075 | AAACAAAAAGAGAAAGCAGAT | - | 6.97 |
| JUN | MA0488.1 | chr12:105006267-105006280 | ATGACCTCATCTT | - | 6.54 |
| JUND(var.2) | MA0492.1 | chr12:105006266-105006281 | TATGACCTCATCTTA | - | 7.07 |
| JUND | MA0491.1 | chr12:104998079-104998090 | GATGAGTCACC | - | 6.62 |
| MEF2A | MA0052.3 | chr12:105013275-105013287 | GCTATTTTTAGC | - | 6.44 |
| MEF2B | MA0660.1 | chr12:105013275-105013287 | GCTATTTTTAGC | - | 6.92 |
| MEF2C | MA0497.1 | chr12:105013274-105013289 | GGCTATTTTTAGCCA | - | 6.49 |
| PRDM1 | MA0508.2 | chr12:105007887-105007897 | TCACTTTCAC | + | 6.02 |
| Pou2f3 | MA0627.1 | chr12:105004758-105004774 | TTTTATTTGCATGCAA | - | 6.07 |
| RARA | MA0729.1 | chr12:105004255-105004273 | AAGTGACCAAATGACCTC | - | 6.23 |
| REST | MA0138.2 | chr12:105003502-105003523 | AAAAGCACCTAGGACAGTGGC | + | 6.01 |
| RFX1 | MA0509.2 | chr12:104996390-104996406 | GGTTGCCATGGCAACA | - | 8.25 |
| RFX1 | MA0509.2 | chr12:104996390-104996406 | GGTTGCCATGGCAACA | + | 8.29 |
| RFX2 | MA0600.2 | chr12:104996390-104996406 | GGTTGCCATGGCAACA | - | 8.48 |
| RFX2 | MA0600.2 | chr12:104996390-104996406 | GGTTGCCATGGCAACA | + | 8.51 |
| RFX5 | MA0510.2 | chr12:104996390-104996406 | GGTTGCCATGGCAACA | + | 8.48 |
| RFX5 | MA0510.2 | chr12:104996390-104996406 | GGTTGCCATGGCAACA | - | 8.59 |
| SP3 | MA0746.2 | chr12:104999662-104999675 | TGCCCCGCCCACC | + | 6.05 |
| SRF | MA0083.3 | chr12:105006306-105006322 | TTTCCAAATAAGGTCA | + | 6.01 |
| TFAP2A | MA0003.3 | chr12:104996855-104996866 | TGCCTGAGGCT | - | 6.32 |
| Twist2 | MA0633.1 | chr12:104997162-104997172 | AACATATGGT | - | 6.02 |
| ZEB1 | MA0103.3 | chr12:105012958-105012969 | CCCACCTGCGC | + | 6.62 |
| ZNF143 | MA0088.2 | chr12:104996763-104996779 | TTATGCATCATGGGTG | - | 6.09 |
| ZNF263 | MA0528.1 | chr12:105000146-105000167 | GAAGGATGAGAGAGAAAAAGG | + | 6.19 |
| ZNF263 | MA0528.1 | chr12:105007354-105007375 | TCTCTCTCTTCCTCCTGCTCT | - | 6.78 |
| ZNF263 | MA0528.1 | chr12:105005819-105005840 | TCCTACCTCCTTTCCTCCTTC | - | 6.79 |
| ZNF263 | MA0528.1 | chr12:105000113-105000134 | GGATGAGGAGGGAGAAGGAAG | + | 6.87 |
| ZNF263 | MA0528.1 | chr12:105007348-105007369 | CCCCCTTCTCTCTCTTCCTCC | - | 7.44 |
| ZNF263 | MA0528.1 | chr12:105000095-105000116 | GAAGCAGGATGAGGAGGAGGA | + | 8.01 |
| ZNF263 | MA0528.1 | chr12:105000110-105000131 | GGAGGATGAGGAGGGAGAAGG | + | 8.15 |
| ZNF263 | MA0528.1 | chr12:105000104-105000125 | TGAGGAGGAGGATGAGGAGGG | + | 8.29 |
| ZNF263 | MA0528.1 | chr12:105000101-105000122 | GGATGAGGAGGAGGATGAGGA | + | 8 |
| ZNF263 | MA0528.1 | chr12:105000107-105000128 | GGAGGAGGATGAGGAGGGAGA | + | 9.44 |
| Zfx | MA0146.2 | chr12:105012141-105012155 | CAGGCCTGGGCCAC | - | 6.15 |
