EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS139-11780 
Organism
Homo sapiens 
Tissue/cell
Myotube 
Coordinate
chr12:12888830-12891230 
SNPs
Number: 2             
IDChromosomePositionGenome Version
rs4763297chr1212889289hg19
rs11055034chr1212890626hg19
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
FOXF2MA0030.1chr12:12889639-12889653TTAACATAAACAAT+6.03
ZNF263MA0528.1chr12:12890533-12890554CCTCTCCTCCTCCCCTTCTCC-6.17
Number of super-enhancer constituents: 49             
IDCoordinateTissue/cell
SE_02384chr12:12889367-12891080Astrocytes
SE_03015chr12:12889561-12890025Bladder
SE_04457chr12:12889399-12890487Brain_Anterior_Caudate
SE_05723chr12:12889250-12890996Brain_Cingulate_Gyrus
SE_06515chr12:12889295-12890622Brain_Hippocampus_Middle
SE_07055chr12:12889264-12890612Brain_Hippocampus_Middle_150
SE_09887chr12:12889463-12890550CD14
SE_10399chr12:12889466-12890156CD19_Primary
SE_11298chr12:12885661-12889102CD20
SE_11298chr12:12889288-12891024CD20
SE_11994chr12:12889317-12890964CD3
SE_13418chr12:12889451-12890667CD34_Primary_RO01536
SE_14411chr12:12889291-12890783CD4_Memory_Primary_7pool
SE_15395chr12:12889422-12890889CD4_Memory_Primary_8pool
SE_16327chr12:12889289-12890803CD4_Naive_Primary_8pool
SE_16955chr12:12889358-12890444CD4p_CD225int_CD127p_Tmem
SE_17376chr12:12889323-12890851CD4p_CD25-_CD45RAp_Naive
SE_19332chr12:12889413-12891128CD4p_CD25-_Il17p_PMAstim_Th17
SE_20110chr12:12887564-12889287CD56
SE_20110chr12:12889323-12891107CD56
SE_20780chr12:12889241-12890995CD8_Memory_7pool
SE_21484chr12:12889406-12890424CD8_Naive_7pool
SE_21956chr12:12889267-12891152CD8_Naive_8pool
SE_24059chr12:12889693-12890061Colon_Crypt_2
SE_25539chr12:12889286-12890978DND41
SE_25894chr12:12889266-12890640Duodenum_Smooth_Muscle
SE_26782chr12:12889510-12890129Esophagus
SE_27782chr12:12889424-12890846Fetal_Intestine
SE_31002chr12:12889358-12890247Fetal_Thymus
SE_31618chr12:12889585-12890095Gastric
SE_32681chr12:12889248-12890518GM12878
SE_34820chr12:12889520-12891049HeLa
SE_42460chr12:12889585-12890140Lung
SE_44374chr12:12889461-12890977NHDF-Ad
SE_44929chr12:12889526-12890707NHLF
SE_45697chr12:12885461-12889249Osteoblasts
SE_45697chr12:12889295-12892730Osteoblasts
SE_47372chr12:12886284-12889123Panc1
SE_47372chr12:12889267-12891175Panc1
SE_50256chr12:12889478-12890056Sigmoid_Colon
SE_52464chr12:12889382-12890237Small_Intestine
SE_53337chr12:12889493-12890332Spleen
SE_55147chr12:12889567-12890034Thymus
SE_56035chr12:12889371-12890742u87
SE_61268chr12:12866751-12890857HBL1
SE_61621chr12:12866181-12890888Toledo
SE_62220chr12:12864939-12895381Tonsil
SE_66441chr12:12889534-12890218Jurkat
SE_67164chr12:12889427-12890439MM1S
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr121288973212889911
Number: 1             
IDChromosomeStartEnd
GH12I012733chr121288605512890944
Enhancer Sequence
TAATCCACCA CTGCCACTCA GGCCTGGGTG ACAGAGTGAG ATCTTGTCTC TAAACTAAAA 60
TAAAATAAGC TCACACCTGT AATGTCAGCA CTTTGAGAAG CTGAGGCAGG TGGATCACTT 120
GAACCCAGCC TGGGTACCAT GGCAAAACCC CATCTCTACT AAAAATACAA ACAACTAGGC 180
TGGGAGCAGT GGTTCATGCC TGTAATCCCA GCATTTTGGG AGGCTGAGGC GGGTGGATCA 240
CTCAGGAGTT CAAGACTGGC CTGGCCAGCC TGGTGAAACC CCGTCTCTAC TAAAAATACA 300
AAAAATTAGG TGAGCGTGGT GGTGTGTGCC TGTAATCCCA GCTACTCGAG AGGCTGAGGC 360
AGGAGAACTG CTTGAACCCA GGAGGAGGAG GTTGCGGTGA GCCAAGATCA CGCCACTGCA 420
CTCCAGCCTG GGCAATAAGA GTGAGAGTCT GTCTCAAAAA AAACAAAACA AAACAAAAAA 480
ACTAGCTGGG CATGGTGGTG TGCACCTGTA GTCCCAGCTA CTTGGGAGGC TGAGGTGGGA 540
GAATCACCTG AGCCTGGGAG GTCAAGGCTA TAGTGAGCCA TGATCACGCC ACTGCACTCC 600
AGCCTGGGTG ACAGACTGAG ACCCTGTCTC AAAAGAATAA ATAAATAAAA TAAAATAAGA 660
GAGTGACTTG AGCAGCTTCA AATAAATTTT ATTGTTTCCT CACTTTATCT AATATTAATT 720
GAAATCCTTA GTCTTATGTT GGGGTTATCC CAATAGGACG TGGGAAAGAA AGTTCAAGCT 780
TTCGCCTTGA TAGTTCTCCA TGATGCTGCT TAACATAAAC AATCGAGTTT TCAAAAACCA 840
AAACTCTTGA TTTCATTAAG TAAGGAGGGT GTAATGTGTA GTGCTTGGGC CGTTAGAGGG 900
GATGTGGTCA CAAGTGGTAT ATCTGAGGCT TTTGAAGGAG TGCATTCAAG GAAGAGCCCT 960
GCTTGGTGTC AGCTACTGAA CCAGAGATCC GAAGAAGTGG ACCTCGCCAG CCTCCTGCTC 1020
CACCCCGCTA CCAGTCTTAG CTGGAGCTCC CTTTTCTTTG TCATACTCAG CCAGTTGCTC 1080
ATTGCTGTTT TAGAGTCTGG CCCATGTTTT GCTCTTTGGC TGTGCGATTG GCGTGAATCT 1140
TCTAAGCAAA TGAATAGCTT AGAGGTGAAT ACTGAATCTT TTGCTTCAAG TAGCTCAGCA 1200
TTTTTGTCTT TCATTTTTAC TAAGTGACTA GATTCAGTAT TCGAAGATGT TTTGGCCAAA 1260
TGATTCATTA TTTATTTGGC TTTAGAAAGA GACTTCAAAA GGATAATAGA AATAAACAAC 1320
CCAGAGGTTT TTTTTTTAAA TTGAAGATTA ATAAAAGAGA GACCTCTGCT GGCTACAGTG 1380
GGGTAACAAC CTAGAGTTGG CCACTGACTC CACAGGAAGC TATAATGGCT GTGACCCACC 1440
CCATACGCTT TTACAGTTGT CAGCAAATTG ATCACTATTT GTTCACTTCT TCAGCAATCA 1500
ACTCAAGTTC TTTTGGAGTT CATTGAAGTG AGGTATAATT CCCAGTCCAA TCACCACTGT 1560
TTCTGTTTCA ATCTTTAGGA AAAGTATTAG TCTTTTATAT TTCTCGAACA TAATAGCTTT 1620
ACATATGAGC CCCTGCCAAA CTGAGACCTG AAATAATTCC TGCATCTTAC CTTCTCTGTT 1680
TCCTTTCCCC TTTTTTGCCT CCACCTCTCC TCCTCCCCTT CTCCAGTAAA ACAAAATAAA 1740
ACAAATCTAC ACTCAAGAGA GAGTACTGAT AGAAAGTGAG AAGGAGGGAG CTGGGCGCTT 1800
ATCTTTGGCA TATCCTCAGC TGAGGATCCA AGCTGGGGGG CCCAGGGTTG GTGTTAACTA 1860
CCTGAGTAGA GCTGTAGTTC CTACTGATGT CTTCCGTGGG ATTTGTTCAA CCGTGGGAAT 1920
GTGGCTGCAC GATAGTGGAG CAAGATTCAG TGAATGCTTC AGAATATGGA GGGTCGTTAT 1980
CTAGGGGGAG GAAGGGGACT GAATGTTCTC TTGAGACCTT TTGTTGGCAA CAACAATAAT 2040
GAGTGCCTAC TATGTGCCAG GCCCTGGACT AAGTACCTTA AATACCTTAA TTCTGTTTCC 2100
TGCTTTTCTT CTCTCTTCAC AGTCTTAAGA ATGTCTTTCT ATGAGAAAAA CATTGAATAT 2160
ATGTAAAGAA CTTACAACAA GGCCTGCATA AAGTAGTAGC TATGCATGTG TTCACTATTT 2220
TATTATTATG TTTTTACTCT GGAATATGCT GCCACTCCTA CACATGAGGA GAGGCTCTCC 2280
CCATACTCAC CAGAGCAAGC AAGTCCTTTT TTTTTTTTTT TTTTTTAAGA CACATGGAGT 2340
CTTGCTCTAT TGCCCAGGCT GCAGTGCAGT GGCATGATCA TGGCTCACTG CAGCCTCGAC 2400