EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-04348

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr1:203143730-203144450

Target genes

Number: 16
Name	Ensembl ID

RP11	ENSG00000235449
KDM5B	ENSG00000117139
RABIF	ENSG00000183155
Y	ENSG00000199471
KLHL12	ENSG00000117153
ADIPOR1	ENSG00000159346
CYB5R1	ENSG00000159348
TMEM183A	ENSG00000163444
PPFIA4	ENSG00000143847
MYOG	ENSG00000122180
ADORA1	ENSG00000163485
MYBPH	ENSG00000133055
CHI3L1	ENSG00000133048
CHIT1	ENSG00000133063
BTG2	ENSG00000159388
FMOD	ENSG00000122176

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:203144251-203144271	CCTCAACCCACCCACCTACC	+	6.48
ZEB1	MA0103.3	chr1:203144303-203144314	GGGCAGGTGGG	-	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_37051	chr1:203137436-203149232	HSMMtube
SE_62066	chr1:203098755-203160301	Toledo

Enhancer Sequence

GGGATGGAGA GAGTGTGAGG TCTTTGCAAT GTGGCCACAG GCGCCCCTCT CCATGGGGCT 60
TCTTTTCCTG CTGGTGATCT GGGGAAATCA GCCTCCCTCT CTGGGCCTCA TTTTCCCCTT 120
GTTTGCCTTC CCTGACTTCT TGTCAAATGG CATCAAAGAC ACCTGATGTT AGAGCCCTGA 180
AATTGTGGCT AGAGATGAGG TTGTTGAAGC CCAGAGAGGG TTGGACACAT TTGCAAAGTC 240
ACACAGCAAG GTAGGGGCAG AGGCAGAGGC CAGGCTGGAC TTGGGCCATG GAGGGGGACA 300
GTGGCAGCAG GGATGTGGCC CCCACACCCC CACCCCATTC CCGCTTTCTC CTCACTGTCT 360
CTTACGCTAA CATTCCCCTC TCCAGCTCCT CCCTTTCCAC TTCCTACAGT TCGGGGTCCT 420
CTGAGACTTA GCACTTCCTT CCCTTCTCAC CAAAGGAGAA CCCAGTGTCC CCTTACCCTT 480
CCCTTACTCA GAAGCTCCTT GGAGCTGAGG ACAAGGGAGC CCCTCAACCC ACCCACCTAC 540
CCTTTCTTGC TCTCCTGCTG GTGGAGCAAG AAAGGGCAGG TGGGTGGGTT GAGGAGCCTA 600
CTGCTCGCAT CCCCTCCTTC TGTATCTCTC CCAGACTGAC CAACCACAGG GCCTGTGCAC 660
TTGTCCCTGC AGCCCTCCAT GACAACCTCC CCTGGGTGTA TGCAAGACTT AGCCCAGCAC 720