EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-04344

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr1:203138220-203138380

Target genes

Number: 16
Name	Ensembl ID

RP11	ENSG00000235449
KDM5B	ENSG00000117139
RABIF	ENSG00000183155
Y	ENSG00000199471
KLHL12	ENSG00000117153
ADIPOR1	ENSG00000159346
CYB5R1	ENSG00000159348
TMEM183A	ENSG00000163444
PPFIA4	ENSG00000143847
MYOG	ENSG00000122180
ADORA1	ENSG00000163485
MYBPH	ENSG00000133055
CHI3L1	ENSG00000133048
CHIT1	ENSG00000133063
BTG2	ENSG00000159388
FMOD	ENSG00000122176

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr1:203138261-203138271	GGGGCGGGGC	-	6.02
ZEB1	MA0103.3	chr1:203138332-203138343	CCCACCTGCCC	+	6.14

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_04089	chr1:203135133-203138379	Brain_Anterior_Caudate
SE_06022	chr1:203134847-203138675	Brain_Hippocampus_Middle
SE_07913	chr1:203136528-203138740	Brain_Inferior_Temporal_Lobe
SE_37051	chr1:203137436-203149232	HSMMtube
SE_62066	chr1:203098755-203160301	Toledo

Enhancer Sequence

CTGGGAGACA TGGTCAGAAG AGAGCTGGGG AGGTATGGAC TGGGGCGGGG CTCTCAACAG 60
CTATCCCCAG GCTTAGGTGT GGACGCCCGG AGGATTCCTC AGCCCTGCTG TCCCCACCTG 120
CCCCCACCAG CCCAGGGCAC AACAGGGCCT GGCCCCTCAC 160