EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-01856

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr1:55527230-55529040

Target genes

Number: 3
Name	Ensembl ID

PCSK9	ENSG00000169174
USP24	ENSG00000162402
GYG1P3	ENSG00000231095

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6	MA0463.2	chr1:55528005-55528021	CATTCCTCGAGAGCAA	-	7.21
BCL6B	MA0731.1	chr1:55528003-55528020	TGCATTCCTCGAGAGCA	-	6.45
HNF4G	MA0484.1	chr1:55528938-55528953	TGCACTTTGGCCTCA	-	6.06
KLF5	MA0599.1	chr1:55528604-55528614	GGGGCGGGGC	-	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I055061

chr1

55526610

55528744

Enhancer Sequence

TGAAGAGGCC CGTGAGGCCG GGTGGGTGGG GTGCTGCGTG TCTCTCCTGC ACAGCTTTTC 60
TGTGTCAGTT TGTGCCACCA CCATACCGCC ATGCATCAGG GTGGCGGTTT GCCAGGTAGA 120
TGCTGTGGGC AGCTTCCGCC ATTGTGTGGA CAGCATGTAT ATGTGTCTCT GTGTGGCTGG 180
GTCTGTTTTT GCTTTTGTCC AGATCAGTAA GGTTTGCTAC CTGGGTACCC CACTCCACTT 240
GGAGTAGAAT GTGCATAAAT ATGGCATAAA GAAATGCAAT ATGCATGCAT TTATTGATTG 300
ATCTATTTTT TTCTGAGATG GGGTCTTGCT GTGTTGCCCA GGCTGGTCTC AAATTCCTGG 360
GCTCAAGCAA TCCTCTGGTC TCAGCCTCCC CAAGTGTTGG GATTATAGGC ATGAGCCGCT 420
GCACCTGGCC TCTCTGATCT ATTTAACAAA CCTGCTGGGA GGGTCTCAGG GTCAGGAGCA 480
GCACTGGGCT CTGAGGACAC AGAGCTCACT CAGCCGTGAC CCAGAGGGGG TGCCTGAGCT 540
GCATGCTGAA GGTTGTTAGC ATGACCAGCA AGGCAAGAAA AGGCCCTGCC GAGATTAGCA 600
AGGCATGTGC CAAGCCCTGG AATGTGACAG CCGGGCCTTC TAGAAACCTG AGTGTATAAC 660
TCTCCTTAAA AGCCAGTAGG AGCTCCTCAA AAGGCAGCCC TAAGGAGTCC ACTCTTAAAT 720
GAACTCAGAG TCAGTTTTAA AATGCAAGTC TGTGTTGATT CTGGTCTGGA TGGTGCATTC 780
CTCGAGAGCA AAAGACAGTC TTGGTCTTGG ATCCACTTGC CCTGGGTACA CTGAGGGCTG 840
CTAGGTTCCA GGTGCTCTTC CTGGCACTGG GGAGGGATAC AGGCCCAAGA GACATGCTGT 900
TCTCCCTCCT GGAGCATCTA TTTTAGTGGA GGAAGACAGA AAACAAACCA TTAATATAGA 960
GTACTGAAAA GATGCGATGG AGAAAACTAT AGCAAGGAAG GGAATGGGGT GGGAGAGAGG 1020
TCAGGAGAGG TCTCGCTGAC AAGGTGGACG AAACAGGCCA TGAGGCAGAG AACATGTTCC 1080
AGGCAAAGCA AAGGCCCCCA GGTGGGGATG TGCAGGGAGT ACCAGGAAAC CAGAGAGGTG 1140
GGAATAGTTA TGAGATGGGG GGTGCCTCAG AGGGGACAGG GCCAAGTCAG GTGAGACCTG 1200
AGGGTCACAG TCAGCAGTGA GCTGGGGCCA TGCAGGGGTC TGGCCTCAGA GGAGTGTGGT 1260
CTGGCCTGGA TCTGAACCTC TCACTGTGGC CTAGCTGCTG AGCTGAGAAG AGATGACAAG 1320
GACCTTGGGC AGAAGCAGGG AGACTGGAGG GAGGCGGTGG AGGGTCCAGG CGTTGGGGCG 1380
GGGCTCAGGC TGGAGTCTGA AGGGAGCCTG CAGGCCTGGT GGGTGGATGT GGGTGGGAGA 1440
GGGGGAGGAT GGCACCAAGG CTCGGGCCCC TGGACAGATG GAGTTGCCAT TAAGTGGGAT 1500
GGGGCAGGCT ATGGGGCCAT CAGTTTCAGA GGGATGAGTT TGGCACTGGC ATGGTAGGCA 1560
TCTGTCTATC TCCACGGCCC TCAAACCAGG CATGAAGCAG GAGCTCACGT GTTTGGTCAG 1620
CCATGGTGCA GAACCGCCTG GGTGGGAGGT GCGGGGTGGG AGATACACGG TTGTGTCCCA 1680
AATGGGCTCT GAGCCAGCGA GGGCCGTCTG CACTTTGGCC TCACAGAAGG ATGTCGGAGG 1740
GAGAAATGAA GTGTGGGTGG GGGTCCCGGG CCACGCTAGA CATGTGCTTT CTTTTCCTCG 1800
GGCTCTGGCA 1810