EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-00058

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr1:1957180-1959010

Target genes

Number: 6
Name	Ensembl ID

GABRD	ENSG00000187730
RP11	ENSG00000243558
C1orf86	ENSG00000162585
SKI	ENSG00000157933
RER1	ENSG00000157916
PEX10	ENSG00000157911

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:1958056-1958071	GAGGTCAAGAGATCG	+	6
ZNF740	MA0753.2	chr1:1957300-1957313	GAGGGGGGGGCAG	-	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002025

chr1

1956840

1957761

Enhancer Sequence

AGCGGGCTGC CCACCCGGAC TCCGGGGGAG AGCCTGCCCG GGCCAAGCGT CGGCGCCTGG 60
ACGCTCCAAG GCTTGGAAAA GCTCGAGCGG CTTCTGCTGC CGGGAGCTGG CGGGCGGGCG 120
GAGGGGGGGG CAGAAGCTGC GCGGTTATTT ATATCCCCCG CAGCTGCTGG GGAAACATCC 180
GCTCCAAGGT CGCCGACAGG AAGCCGGCAG ATGTGGCTTT TTGGCCAACA CAGTGCCTTT 240
TGGTTTTTAA AATGGGGTGG AATTCACATA ACATAAAATT AACCTTTTTA AAGTGAACAA 300
TTCAGTGGCA TTTGGCAGAT TCGCCACGTT GTGCAACCCC ACCTCTGTCT GGTCCAAAAC 360
ATTTCAAGAC CCCAAAAGGA GACCCAGCCA CTGAGCAGGT GCTCTCCACT CCGCCCTCCC 420
TGGAGCTCCA GCAGCCACCC GCTTGCTTTC TGTCTCTGTG GGTCTGCCCA GAGACAGAAA 480
CATTTCATCG AAAGGGAATC ACATGCTGTG TGTGGGACCC TTTATGACTC CGGCTTCGTT 540
ACTCAGCATC ACGTCCTCAC GGTTCATCCC AGTGGAAGCC GGAGTCAGGG GCGCCTTCTT 600
CTTCATGGCC TAGGCGATGG CCCACGGCAG GGGCGCGCCA CACCTGCCTC CCATCCCTCT 660
GCCGAGGGGC GCTTGGGTGG CTTCCGGCGT TGGCGAATGT GAAAACACTG CTATGAATGT 720
GTGTGCGCGC ATTTGTTTGA AAACCTGTTT TCAGACACAT GCCTCTTAAA GATGGAATTA 780
GTTCATGACA CTTAAAAAAT CAGGAGGCAT GTGGCCGGAT GCGGTGGCTC ACGCCTGTAA 840
TCCCAGCACT TTGGGAGGCC GAGGTGGGTG GATCACGAGG TCAAGAGATC GAGACCATCC 900
TGGCCAACAT GGTGAAACCC CGTCTCTACT AAAAATACAA AAGATTCGCT GGGCGTGGTG 960
GTGGGGGCCT GTAGTCCCAG CTACTCAAGA GGCTGAGGCA GGAGAATGGT GTGAACCCGG 1020
GAGGCAGAGC TTGCAGTGAG CCGAGATTGC GCCACTGCAC TCCAGCCTGG GGACTGAGCG 1080
AGACTCCATC TCAAAAAAAA AAAACAAACA AAAAAAAGAA ATCAGGAGGC AGCCGGGTGC 1140
AGTGGCTCAC GCTTGTAACC CCAACACTTT TTGGAGGCTG AGGTGAGAGT ATACTTGAGC 1200
CTGGGAGTTT GAGACCAGCC TGGGCAACAT AGGGAGATCC TGCCTCTACA AAAATAATAA 1260
AAAACATTAG CTGGGCTTGG TGGTGTGCAC CTGTGGTCTC AGCTACTCGG GAGGCTGAGG 1320
TGGGAGGATT ACCCACCTCA AGCCCCGGGG GGTTGAGGCT GTAGTGAGTC AAGATTGCAC 1380
CACTGCACTC CAGCTTGGGT GACAGAGTGA GACCCTGTCT CATAAACAAA CAAAAACATC 1440
GGGATATTTT ACATAGGAAT TTAAATATTT GACCTCTCCT AGAAAATCAA GTGCGTGGCA 1500
ACTCTGGGCC TATTCCCGTG TGTTCCTCAG CCATCGCTCG GGCCAGGGCC TGGGTGTGAA 1560
GGCTGTCCCC TGCCCCGTAG GCCCCCAGCC TAGTTCAATA GTCAAGCGTT TTGAAGAGAA 1620
TGAATGAAAT CCAGTTCTTG ACGGTCCTAA AGGAATACTT GACGTCTATG AAGTTGAGCA 1680
GTTTCCAGGT TTACCTGGAT TCTGGGCAAA CACAGTCTGA GAAGTAGCTG GGGCTCCAGG 1740
CAGGTGCTCA GGGGGCATCT CTGCAGGGGA ACTGCCAGGC TTTCGGGAGG GCTGGCCTCA 1800
CCCCCAAGGC CTCACTGCCA TGCTTGTCTT 1830