Tag | Content |
---|
EnhancerAtlas ID | HS138-34098 |
Organism | Homo sapiens |
Tissue/cell | MSC_BM |
Coordinate | chr5:149515440-149516570 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Klf12 | MA0742.1 | chr5:149516016-149516031 | GGCCACGCCCTCCAT | + | 6.63 | SP1 | MA0079.4 | chr5:149516014-149516029 | CAGGCCACGCCCTCC | + | 6.1 |
|
| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_01616 | chr5:149513854-149522322 | Aorta | SE_02316 | chr5:149516216-149525489 | Astrocytes | SE_06395 | chr5:149513905-149524600 | Brain_Hippocampus_Middle | SE_37403 | chr5:149516288-149525579 | HSMMtube | SE_38877 | chr5:149513384-149525852 | IMR90 | SE_41433 | chr5:149513840-149531321 | Left_Ventricle | SE_42972 | chr5:149513886-149519392 | Lung | SE_45926 | chr5:149513524-149516060 | Osteoblasts | SE_45926 | chr5:149516412-149531211 | Osteoblasts | SE_46663 | chr5:149515246-149515803 | Ovary | SE_46663 | chr5:149515969-149519278 | Ovary | SE_48989 | chr5:149514856-149519371 | Right_Atrium | SE_53930 | chr5:149514696-149525823 | Spleen |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH05I150133 | chr5 | 149513443 | 149528910 |
|
Enhancer Sequence | CCTTTGGGAG AGGAGGTATC AGACATCAGG AAACAGGGGC TTCAGCACCT CTCCCAAGGC 60 TGAGCCTGCG AGGAGGCCAC GTATGCACAG CCCTCAGGTC CTTGAGGAGC ACAGCTCCTT 120 TATCCGACAG ACTGGGGCTC TCCAGCCATG GCTCTGAGGA CCGCTCGCCC AGCTCCAAGG 180 CCCCAGGGAT TCCTCTGGAC TGCCTCTGTC AGTCCCGTTA GACCCCAGCC TCTGAGTCCT 240 TCAGCAGTGC CATGTGTAGG CAGTAGGCAC CAGAAGGGGC CAGGAAATCC TCGGGAAGCA 300 ATTCCCTGGC CTCCAGTTCC TGCATTGCTT CCCAGGTCAC TTTCTGAGCC TCTTCCCTAC 360 AGCTCTCTGC CCCCTCCCCC GACTGCCCAG GTTCTGCCCA AGGCCCAGAG GTGGCTCTGG 420 GTGGGAGAGA GATGGGAGGG AGGGGCTTAG GTAGCTCAGA GGGGGGCCAG AAAAGATGCT 480 GAGGCCCTTT TGGGCTGGAG GGAACTGGGG TTGGGGGTGT GTGTGTGTCA AGTGATTGGT 540 CCCCCTCCAC GACATCCCCT GGAGAAGGAT TTTTCAGGCC ACGCCCTCCA TGCCCCCTGG 600 TGATACAGAT CAGGAGGGGA GGTGGGCGGT CAGGCAGCCA GTCCATCTTA TGGCCAGCTG 660 CCGGGCAGGC TGCTGGCTGG TCATTAATTG CTGGGTCAGT CGCTCAGCCC CTGCAGAGCT 720 GAAGACATGT TAACGGGCAG GAGTGAGGGG TGGGGTGTGC TGAGAAGCCC AGCAGGGACC 780 TGGAAGCTCC CAGCCAATGA GGGGTCCAAG CCGAGTGCCA CAGATCCACC AGACCGAGGA 840 TAGGAGGCCA GGGGTGTGGG CCAGAAGGTG GGATGGGGTC TGGAGGGCCA ATCAAAGGAT 900 TTGAGCTGAT GGTTCTGGAC AAGCAGGGGC CCACTGACGC TTTCTGAGCT GAAGGGCTGG 960 CAGCTGGAGG CCTCCACAGA GCCCACTGGA AATCCTGAAA ACTAAAGCTG AAGGGCAGGG 1020 CAGTGTGCCT GGTGCTTCAC GCCCTGCCAC CAGCACACAT CACCCCTGCC AGCTCCAGGG 1080 TTCCACTCCG CAGCCCCCCG GGTCCCCTAC CTTATCTCCC ATCTACCCAC 1130
|