Tag | Content |
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EnhancerAtlas ID | HS138-17440 |
Organism | Homo sapiens |
Tissue/cell | MSC_BM |
Coordinate | chr18:2958180-2960640 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr18:2960385-2960406 | AATAATTTTCAGTTTCCCTTT | + | 6.19 | IRF1 | MA0050.2 | chr18:2960391-2960412 | TTTCAGTTTCCCTTTCCCTTG | + | 6.65 | IRF1 | MA0050.2 | chr18:2960336-2960357 | ATCTAGTTTCTGTTTTGCTTT | + | 6.77 | IRF2 | MA0051.1 | chr18:2960390-2960408 | TTTTCAGTTTCCCTTTCC | - | 6.41 | Lhx3 | MA0135.1 | chr18:2959845-2959858 | CATTAATTAATTT | - | 6.54 | POU6F1 | MA0628.1 | chr18:2959846-2959856 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr18:2959846-2959856 | ATTAATTAAT | - | 6.02 |
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| Number of super-enhancer constituents: 35 | ID | Coordinate | Tissue/cell |
SE_00574 | chr18:2955664-2962654 | Adipose_Nuclei | SE_09781 | chr18:2957955-2964204 | CD14 | SE_10621 | chr18:2956157-2963999 | CD19_Primary | SE_11211 | chr18:2955421-2965599 | CD20 | SE_11888 | chr18:2954270-2965406 | CD3 | SE_13797 | chr18:2959029-2959837 | CD34_Primary_RO01536 | SE_13797 | chr18:2960020-2960860 | CD34_Primary_RO01536 | SE_14570 | chr18:2955417-2965583 | CD4_Memory_Primary_7pool | SE_15580 | chr18:2958273-2965388 | CD4_Memory_Primary_8pool | SE_16149 | chr18:2959566-2962287 | CD4_Naive_Primary_7pool | SE_16392 | chr18:2958193-2965256 | CD4_Naive_Primary_8pool | SE_16996 | chr18:2958261-2964094 | CD4p_CD225int_CD127p_Tmem | SE_17424 | chr18:2953224-2965618 | CD4p_CD25-_CD45RAp_Naive | SE_17870 | chr18:2953882-2974054 | CD4p_CD25-_CD45ROp_Memory | SE_18346 | chr18:2955510-2974150 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19436 | chr18:2954812-2965462 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20084 | chr18:2955732-2964153 | CD56 | SE_21011 | chr18:2958230-2964978 | CD8_Memory_7pool | SE_21798 | chr18:2959152-2964179 | CD8_Naive_7pool | SE_22207 | chr18:2958088-2965485 | CD8_Naive_8pool | SE_22362 | chr18:2953866-2965617 | CD8_primiary | SE_26140 | chr18:2958139-2962798 | Duodenum_Smooth_Muscle | SE_28431 | chr18:2959830-2962157 | Fetal_Intestine | SE_29294 | chr18:2959203-2961178 | Fetal_Intestine_Large | SE_31871 | chr18:2959820-2960346 | Gastric | SE_32704 | chr18:2956087-2964115 | GM12878 | SE_46307 | chr18:2958145-2960053 | Osteoblasts | SE_46307 | chr18:2960219-2962620 | Osteoblasts | SE_51026 | chr18:2959588-2960299 | Sigmoid_Colon | SE_52825 | chr18:2958971-2960373 | Small_Intestine | SE_52825 | chr18:2960375-2962329 | Small_Intestine | SE_55616 | chr18:2958976-2960334 | Thymus | SE_58874 | chr18:2954099-2995404 | Ly3 | SE_59888 | chr18:2955879-2985795 | Ly4 | SE_62302 | chr18:2955378-2999752 | Tonsil |
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| Number: 1 | ID | Chromosome | Start | End |
GH18I002955 | chr18 | 2955253 | 2963963 |
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Enhancer Sequence | GAAAAAAAAA CTTTTATAAA TAATCAAGTA ATCAGCTTTT TCTGATATCA ATAAATTTTA 60 AAATATCAAG TACACATTTA CCTTCTAAAA GTAAACTCCT AAGTTACTAA ATTTACTGGG 120 AGTACTGCTG TTCTACCAAA CAATTACGTA TCAATGGCAG TGGGAAAATT ATTATACTAC 180 ATCTCTCTAA ACAGTGGTTT TAAGGTGGTC ATGATTTCAA ATTCACTTCA TAGGTACACC 240 CGTATTTGAA AATTTGGGGT CTTACTTTCA CATCAATGGC CAGCTTTCCC TAACCCAAAC 300 TGACTTAAAA TAAGACAAAT AGTTAATGCA AATTGCCAGT GTATCTCAAA GTAGGCATGA 360 TTTCAGTTTT ACTCTCACAG TTTTTCAGTT TTCTCACAGG AAAGCTGTTT TGGTAAATCA 420 AATGGCCAAA TTTCCTCCCA AACATATTCT TTGGGTTTCT GAGATACTAA GGGAGTAGGA 480 GGAAAAAAAT TCTCTTTTCC TGTGTCTCAT GAGTACATTC CTATTAAAAA TGCAACGTTT 540 TGACAAGATA GTAACACAAC GATTGTGTAG CTTTTGCACA GGAATTGTAT TATTTCCTAA 600 ATTAGAGGCA CACAGCAAGC AGGAAAAGGT GTTTTATCTA CTTGGTCACC ATTTACAGAT 660 GCATACATGC TTATAAATAC ATCTGCCTTC AGGTTCCATT TTGAAAGGCC AGACACTGAT 720 CCAATGTGAT AAAAAACAAT CTCAGCAAAA AAAAAAAATA ATGATGATGA TACCTTATCA 780 GCAGTTTTAC AATAGATCCA TACACAACTA ATGGGAAATT TCAGTTTGTT GCCAATTCCC 840 CCAGAACAGG TCCAGTCTGA AAGTACTATT GGTGTTACCA CAAAGAAAGA AAAAATTTCA 900 GAGAACCTAA ACTATGGCTA AATAACACTG TTTTGCAATG GAAAGTTTCT AAGTCCCTAA 960 GTAAACTGCA ACTGCTTTTG CTTTCTAAAG GGTGACTCTG AACAGAGGCC AGACCACACA 1020 AGCCCTGCTA CCCTGAAATG TGGTTCTCCA GTGGAAACTG ATTTTGTAAT ACCTAGAAAT 1080 GAGATGTTTT TCCTGGAGGA AAAAAAGAAA AAGAATATCT AGTTTTGTGA AATCCATTTT 1140 CTTTCACTCT CAAAATAACA TTTAAGTTTA ATTAAATAGA GGGAAATTTC TATTTAAAGC 1200 TCAGCTATAT AAAATAGCAA AAAGCTGAAA ATAAATGTTT TCGACTTACA CCAGTGGTCC 1260 TCTACCACAT ACTTTTAGGT CTGTGCCAGA AAATGGTGAG GCTCTTTTGT TGTGCTTTAA 1320 AATGTTGACA AAGCCTTTCT ATGTTATTTA AGTAGATACT GCGAGGCAAG AATAGAAAGA 1380 GAAATCTGTG TACCTGCCAA GTGTTATTAC TAGCTCTGTT TTCTAATTTG ATTGACATCA 1440 GATATACTAG CAAAACTTCC AGCTGCTCCA TAACCTGAAG AGGATAAGAA AAACCTACAC 1500 AAATATCTTC TTCCTGAATG AATCTTCCCT AAAACAAACA AAAGTCAACC AGCCTATGGT 1560 CTGTTGGTTA GCATTTCAGT CAAATATGGG GACAAGTCCT GGTATCAACA ACAGAATTTA 1620 GATTACAAAA GTTTTTACAG CTTTGTCAAA ACAAACAAAA TGTGGCATTA ATTAATTTCC 1680 TTTAAAAAAA AAAATATGGC CAGGTGCGGT GGCTCTACAC CTGTAATCCC AGAACTTTGG 1740 GAGGCCGAGG CCGAAGCCGG TGGATCACTT GAGGTCAGGA GTTCGAGACC AGCCTAGCCA 1800 ACAAGGTGAA ACCCCGTCTC TACTAAAAAT ACAAAAAATT AGGGGGGCAT GGTTGCACGT 1860 GCCTGTAATC CCAGGCACTT GGGAGGCTGA GGCAGGAGAA TCGCTTGAAC CTGGGAGGCG 1920 GAGGTTGCAG TGAGCCAAGA TCACACCGCT GTACTCCAGC CTGGACAGCA AAGCGAGACT 1980 CCGACTCAAA AATGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTTCT 2040 TGATTATACC CACCTATTCC ATTTACAATT AGTATGAAGG TATTAGCCTA AGTATTTAAA 2100 AATACTATAT AAGGTAAAGG AAATTTTTCT TTTTCTAAAT ATGTCTAAGT TCCCCCATCT 2160 AGTTTCTGTT TTGCTTTTCT GAGTTGCAAC ATGTAAGATT ATTATAATAA TTTTCAGTTT 2220 CCCTTTCCCT TGAAGAGACT TCTGCAGTCG AGCTTTGTGG TTTTCAAAGT AACTTCAAAA 2280 GCAATACATA AAGGTTGACT TCTCGTAACA TTGTCTCAAC ATCATTCAGG TTAAAAAAAA 2340 AAAAAGGCCT AGAAAACTCA CAATAGCGAT TTATTCATAG AGGATGACTT TTCTACTCCT 2400 TGAGGACACT CACTCACTTT CTCTTTGAAT CTCAGGATGA CTTTTCCTCT CCTTGAGGAC 2460
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