Tag | Content |
---|
EnhancerAtlas ID | HS135-00350 |
Organism | Homo sapiens |
Tissue/cell | MM1S |
Coordinate | chr1:226308950-226310700 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:226309331-226309350 | GGGCGCCCTCTGGTGGCCG | - | 8.46 | KLF5 | MA0599.1 | chr1:226309706-226309716 | GCCCCGCCCC | + | 6.02 |
|
| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_10465 | chr1:226308614-226312011 | CD19_Primary | SE_11118 | chr1:226308117-226312770 | CD20 | SE_23364 | chr1:226308734-226310771 | Colon_Crypt_1 | SE_23849 | chr1:226308866-226310754 | Colon_Crypt_2 | SE_24831 | chr1:226308817-226310793 | Colon_Crypt_3 | SE_26794 | chr1:226308854-226314046 | Esophagus | SE_31597 | chr1:226308901-226313436 | Gastric | SE_41844 | chr1:226308832-226309318 | LNCaP | SE_41844 | chr1:226309342-226310840 | LNCaP | SE_43265 | chr1:226308751-226312172 | Lung | SE_43763 | chr1:226307893-226314281 | MM1S | SE_47729 | chr1:226309030-226309272 | Pancreas | SE_47729 | chr1:226309344-226310826 | Pancreas | SE_50502 | chr1:226308670-226313842 | Sigmoid_Colon | SE_52861 | chr1:226308845-226313545 | Small_Intestine | SE_56941 | chr1:226308926-226312000 | VACO_400 | SE_62016 | chr1:226296810-226321627 | Toledo | SE_63137 | chr1:226295246-226322063 | Tonsil | SE_65669 | chr1:226308701-226312462 | Pancreatic_islets | SE_67238 | chr1:226307893-226314281 | MM1S |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I226121 | chr1 | 226308702 | 226313903 |
|
Enhancer Sequence | TTAGTAGGAC GTCGTCAGTG CCCTTGCTAA GAGAGTTCCC ACGCGGGGCC TCAGGGGCGG 60 CGGGGCCGCC TTCCCCCACG GCCAGCCTAG GGAGCTTGGG AATCGCGACC CAATGCACAG 120 ACGGGCAGTG CTCGCTCTCT CTTCACAGGC GGGAAACCGA GGCACAACGA CGGCTAGCAC 180 CTGCCCCGAG GTCACACGGC GACCCAACTC GGTTCTCTGG CCGGCGGCCT TGTTGGTTCC 240 GGTCTGGGAA AGGGACCCCG CAATCGTCCC TCCGGCCGCC AGCAGCGCCA GGCCCCCCCC 300 CGCAGGGGCC GGGGGTGGCG GGCCCGCCGC TGACCTCCCC CGCCCGGCCT GGGTCCCGCG 360 CTCCGCGGGG TGACAGCAGC CGGGCGCCCT CTGGTGGCCG CCGCGCGCAG CAGGCGGGAG 420 CGCGGAGCGT CGGGGCCTGC AACCGGGCGG GGATGACGGG GGCCGGGGAC CCTGCACTTT 480 GGGACGACCT GGCCTGGTGG CCGCGCTTCC TTCGCTACAA AAAGGAAGCA CATCTTGGAA 540 ACACCGAACT TCTGTGACAC CAGTAGTTAC ACCTGGCCTC TGAATCGGGC GAGCAGCGCC 600 CTCGCGCCCC CAGCGCTGAG CAGGGGCGGG CGGGGAGCGG AAACGGTGGC TGTGGTTGTT 660 GCCGCGCGGC TGGGCGCCTG GGGAGCCCGC GGAGGGGCGC GGCCGCCAGA CCCCGCCCGG 720 CCCGGAGGTG AGGAGACCTC AGCCCCGGAC GCCGAGGCCC CGCCCCGCCG GCGATGCACC 780 CCCCGCCCAC CTCCGCGCCC CTTTGTTCCG CGACCGCAGT CCCGCCGAGA GCCGCACTGA 840 AGAGCCCCAG CCTGGCCGTC CCGCGGTTTC CCGCCGCCTC ACCAGTCTCG GGCGGGAGGG 900 GCCCCGGCGC TGGCGTGGCC GCGGCTCCCA CAACGCAGCC AGGACTGCAC TCGGGGCTGC 960 TGGGGCCCGC GTGCGTCCCG GGCGGCTCCA CGCGTCGGGG TCGCCCCCGC GCCTCCCACC 1020 CCCGGCCTCT CGGGGCCGCC GGCTCGCGCG CCTTCCAGGC GAAGGCCAGA GGCCGCAGTG 1080 AGGGGCACCG AGTGGCGGGC TCCTCCGCAC CACCCCCGGG CTTTATAATA AAAGTCGCCG 1140 TTGTTTAAGA GCCAGGTCGG AGGCGCCGCT TTCTGGGCGG TGAAAGCCGA AGCGAGAGCG 1200 GGCAATTCGC TGCGGCGGCG GCCGCTTCCT GGGCGTCGGT CCAGTGCCCC GGCCCGGCCT 1260 GGGAGACCCG CACCAACCCC GGGAGGGAGG ACGGGGCGCG GGCGCAGCCT AGGGGCCGAA 1320 GCACTGCACG CACGGCCGGC GCGGGGGCAG AGGGGAGACA GGGAAGCCTG AGCTCCGCGC 1380 TGCTGAAGGC TCCGGGGATG GGTGGGCGGC GGTGAGGTAG TCTTGCCCGG GCCCTGCCCG 1440 CGTGGGCGCT TTCTGAGTCT CTGTCGCGTG ACGGAGGCGG GACCTAGGCT GTGTCTCCTG 1500 CGGGGCGAAA GCACGGAAGA GATCCGAGGG CATTTCTTGA GCCTGGCAGG AGGCCAGGGG 1560 TTTTACAGGG CAGGAAGGAA CCTGGAGGAA CCGAGGAGCC ACGTTGTTGG TTGGAAAGAA 1620 GGGTGGCCAG GTGGGGAGGA GTCTGGCAAA GGGTCCCAGA CAGCAGGAAG GGCACCTGTG 1680 AAGCCGCCCT GCCGAGTGTG TGGTAGAGGC GGGGTGAAAT GAGCACTGCT CATAAAAGTG 1740 ACTGTTGTGA 1750
|