EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-43065

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr4:54968700-54970490

Target genes

Number: 5
Name	Ensembl ID

LNX1	ENSG00000072201
RPL21P44	ENSG00000229585
CHIC2	ENSG00000109220
RP11	ENSG00000242670
PDGFRA	ENSG00000134853

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SPI1	MA0080.4	chr4:54969043-54969057	TACTTCCTCATTTC	-	6.59
SPIC	MA0687.1	chr4:54969043-54969057	TACTTCCTCATTTC	-	6.93

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH04I054103

chr4

54969568

54970638

Enhancer Sequence

CCTGCCCCCT CCTCCAATGT CTAGAGAAAG GCATATGCAG GAAAAAGCTG TCTGAGGAAT 60
TCGAGGAAAA TGTTGAGTAA GAACTTGGTA ATGTGGGTCT CTTGACTGAG GGAGTTTGTG 120
GCTCAATGGG TTTTCTATGT AACAGAACTT TCGCCAAGGA GACACCTTTA GTCATGATGG 180
CATCTACCAG GCAGTGCCTC TCCATCCTTA AAATAGGCAA CCTCCTCACA GTTGATAGGA 240
CAAATCACTC CATTTGGAAT GACACTGACC ATTAACGACA GGTAAACCTT TATTTAGCAA 300
GGAAGGGTAA AAATCCCCCA TCTAGTTTTT GTTTTCTTCT TTCTACTTCC TCATTTCTCT 360
CAGTACGAAA ACTTGAATTA TGTGAAGGAA TTTGTAGAGT CAGAATAGTT TTAGGAAGAG 420
CAACAATCCA TCAAACAGGT CAGAAGCAAA CAGTGGAAAC TTAATAACGA TGCTACAAGC 480
AGAATTAGCG GGTTTCCCTC AATGTTAAGA AAACAAAAAG TCAGGGACAG GAAGTATTCT 540
GTTCAAAGAT TTATAATCTC ACTTTTTCAA AGCAGCCCAG AGATGCCTTT AGAGCTTTGA 600
GTTTTGGGGC TTTTTTTCCC GGTCACCCTA ATATTCAGTT AATTTGGCTC CCTTCTAGTC 660
CCTTCCAGCC CACCCCCCTT CCCATAGCCT AGCAGAATCA CTTCCTTTAA GCCTGGTCCC 720
AGAGAAGACT TATTTCTAGC TCTTCCCTCA GCAGGGCAAC TGGCTCTCTC CTCAGTGCGG 780
CCTGGGCTTG TTATCTTAGG GAGAGAAGTG AAGAAACTGG AAACAGGAAA ACGAAGAGAT 840
CTCATTCCCT GCAAGCTGAG CCCCACTAAT CCTCAACCGG TGTGATTTCT GATTAGGTTC 900
TATAAAGACG CCACCCAATA GGTTCAAGCC ACAGGAGTTA ATGACAACAC ACATACACAA 960
GGGCTTTAGG TCTGAGTTAC TAGAGGCCGG TCGGACTGAA CCTCACCAGG TACGGCTGGG 1020
GTTCTAAAAC TGGACACGGT TTTCCCTGAG TGTTGTCTTT AGCGCGCGCG CGCGCGCGCA 1080
CACACACACA CACACACACA CACACACACA CACACACACA CAGTAGGCTC AGAAGGAAAA 1140
TCCCTCTTCG TTCCGTCAAG GGACATAGGG AGGAGGGCCC GCACTGTGTG AGGCTGAAAA 1200
GGGAGCTGCC GGCGCTTTGT GCAATGTGCT GAGCTCTGTC CTGCGCAGAG GTCCCAGACA 1260
GCCGGCTCAC TACTGCCTGG CCTGGGAAGC TCAGGCCTCT GGATCTCTTT CCTCCTGTCT 1320
CTCACGCGCA GAGCTCCGGG CTCTTCGCCC TGCCCGCCAC GAAAGGGAGG AGGCGCAGGC 1380
CGGCTGCCTT TCCAAAAGAT TCTGTCTCCC TTCTTCCCAA GAAGCAGGCC TCTCCGCGCG 1440
CGAGAACAGA GGTGGGAGGA CGGGAGTTTG CAGGCGCAAA GAACAGGAGT TTAAGCAGAC 1500
TATTTCCACC AGGGGAAATA AGAAGCACAA AGAGCGCCTG CTGCAGCTCT TTGCGCTCTT 1560
GCCCAAAGCT AAGCTTCCTC TGGGCTGTGG GGAGACTCCT CTGGTCCCCG TTCCATCTAC 1620
CCAGCCCGGC CCCTCTGGGG CTCAGCGCTT GGGTTTAGCC CTCCCCTATG TCCATGACTA 1680
GCCCCGATCA CAGTCTCTTA AGCCTCTCCC GGCCCCCGGC TCCCAGGCCC TGCGGAGCCA 1740
AGCACTTGGA ACACCAGGTA CCGCGCGCGG TGGACCCAGC TCTGCCATGC 1790