EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-42206

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr4:8567330-8570820

Target genes

Number: 5
Name	Ensembl ID

GMPSP1	ENSG00000250471
METTL19	ENSG00000155275
RP11	ENSG00000205959
GPR78	ENSG00000155269
CPZ	ENSG00000109625

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HEY2	MA0649.1	chr4:8567762-8567772	GGCACGTGTC	-	6.02
MEF2A	MA0052.3	chr4:8569007-8569019	GCTAAAAATAGC	+	6.44
MEF2B	MA0660.1	chr4:8569007-8569019	GCTAAAAATAGC	+	6.92
MEF2C	MA0497.1	chr4:8569005-8569020	AAGCTAAAAATAGCA	+	8.03
Npas2	MA0626.1	chr4:8567762-8567772	GGCACGTGTC	+	6.02
Nr2f6(var.2)	MA0728.1	chr4:8567681-8567696	GAGGTCAGGAGTTCA	+	6.22
SREBF1	MA0595.1	chr4:8568793-8568803	ATCACCCCAC	+	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH04I008566

chr4

8568015

8570821

Enhancer Sequence

TGTAGAGAAA CTCTGAACTA AACTTTATCT CTCAAAATTT GTCTTTACAA TCTCACGCGT 60
CCACCTCTTC CATGATAGTC CCTTGGCCTT GAGAGGTTGA ATGGTTTTAA TTTCTGGCCC 120
TGCTTCTCAT AAATGCAGCT TATTTTGATT ATCATCTTCT CCTGGGTCTG AAGATGAGAC 180
TTTAACTGCT GTCAGTGTTT AAGGTTTAGC GGTCTTGGTG TCCTTTTGGA CCCAGCCATC 240
AAATCCTTGT AACTTAACAG CACGAGGACT TTAAAAGCAA TACAAGGCCA GGCTTGGTGG 300
CTCATGCCTG TAATCCCAGC ATTTTGGGAG GCCGAGGTGG GTGGATCACC TGAGGTCAGG 360
AGTTCAAGAC CGGCCTGACC AGCATAGTGA AACCCCATCT CTACTAAAAA TACAAAATTA 420
GCCAGGTGTG GTGGCACGTG TCTGCAATCC CAGCTACGTG GGAAGCTGAG GCAGCAGAAT 480
TGCTTGAACC CGGGAGGTGG AAGTTGCAGT GAGCCAGGAT TGGCCATTGC ACTCCAGCCT 540
GGGCAACAAG AGTGAAACTC TGTCTCAAAA TAAATAAGCA ATACAGAAAG TTACATGGAC 600
ATAATAATTT TTTTTTAAAT CTCAGTTTTA GTAAGCAAAT AAAAAACTTA ATAATGATGA 660
CATAGGAATT ATTTCAATAA AACATGAAAT ATGGCCAGGT GCGGTAGCTC ATGCCTGTAA 720
TCCCAGCGCT TTGGGAAGCC AAGGCGGGCA GATCACTTGA GCCCAGGAGT TTGAGACCAG 780
CCTGGCCAAT ATGTCAAAAC CCCACATCTA CAAAAAATAC AAAAATTAGC TGGGTGTTGT 840
GGCATGTGCC TGTCATGCCA GCTACTTGGG AGGCTGAGGT GGGAGGATCA TTTGAACCTG 900
GGAGGTGGAG GTTGCAGTGG GTCATGATTG CAGCACTGCA CTCCAGCCTG GGCGACAGAG 960
AAACAAACCC CAAAACATAA AATATGTTTG TTAGGCCAGT TACCAGAAGC CAAAACAAAA 1020
ACCCCACCTT CTGCAGTGTG ATTTTTTTCC CTATGGGAAA TCCAGTTAGT TGGCCTTGCA 1080
AGTCAAAACT GAAAACGGTA CTTGAATTAA TTAGACACAG GAAGAGTGTC TCCTGGTTCA 1140
TAAGAGAAGG TGTTGGGTTT CATAGAATGA TTTAGACAGG AACAGCAAAG AGTACAGAAT 1200
GTTATAGTAG AAGAAAATAC CCTTTAGGGC CGGGCACTGT GGCTCACACC TGTAATCCCA 1260
GCACTTCGGG AGGCTGAGGA GGACGGATTG GATCACAAGG TCAGGAGATC GAGACCATCC 1320
TGGCCAACAT GGTGAAACCC GTCTCTACTA ACAATACAAA AATTAGCTGG GCGTGATGGC 1380
GCATGCCTGT AATCCCAGCT ACTTGGGAGG CTGAGGCAGG AGAATCGCTT AAATCAGGGT 1440
ATTGGAGGTT GCAGTGAGCC AAGATCACCC CACTGCACTC CAGCCTGGTA ACAGTGAGAC 1500
TTTGTCTCAA AAAAAAAAAA AAAAAAAAAA AAAGAAAATT CCCTTTAGAC CTTTAAGATA 1560
AAACATCTTT AGCATCAGAT CACAACAATA GTTAGAATCC GAGTAAAAAA GTGAGAGGAG 1620
TTGAGAAAAA AGTTGAAGGG GAGAGATTAT CTCAGACCTT CTCAAATGGG AGAGAAAGCT 1680
AAAAATAGCA TGTCGACGAA GAGTCAAACT CTAAAATATT TAAAGAGATT TATTGTGAAC 1740
CAAATGTGAG GATCATGACC CCCTGGCACA GCCCCAGGAG GCACCGAGAA CAAGTGCCCG 1800
AAGTGACTGG GTTACAGTCT GATTTTATGC ATTTTAGGGT GTCAATCGAA GAAAATGACG 1860
AGACAAGTTT CAATCATTTT AGGAGATTTA TTTGCCAACA TTAAGGATCT GCCTGGGAGA 1920
CAGGTCTACG CCTTTCTCTG AAGATGATTT TGAGGGCTCC AAATTTAAAG GAGAAAGGGT 1980
GGGATATTGA GAAGCTCAGT TTTCACATTA AAAAAGGGGC GAAGGAAAAA TGTGGGGAAC 2040
CTGCATTTTA CATAAGAGAA CACCGACAAA ATGGGGTAGG GGAGCAATCA GACATGCATT 2100
TGGTCTGGCG GTGGGGTGGG GGGGCCAGTG TGACTACACC CGTAAAGATA AGCTATCAAT 2160
TTGCATTGCC ATCATGAAGT TTTAACAGCT CACTAGGAAT TTACTTGTGG GCAAAATATG 2220
GGGGAGGCTG GTAGCTTTTC ATCCTGTAGC CATCTGATTC AGGAACCAAA AGATGGAGGC 2280
AGGTTTGCGT GACCCAGTTC CCAGCTTGAC TCTTCCTTTT AGCTAAGTGA ACTTGGGGGT 2340
CCCCAGATTT AATTTCCTTT CACAGGGGAA ACTGAAGTTA CAGGCAGATG TCAGTCAGTA 2400
CATAGAAGGT ATACATTGGT TCAGTCTGGA AAGGCAGGAG CACTGGAAGT GGGGGCTTCC 2460
AGATCCTAGA TGGATTCAGA GATTTTCTGA TTGGCAATTG GTTTAAACAG TTAGGATTAT 2520
GACTTAAAGA TCTAGAATCA ATAGAAAGGA GTGTCTGTGT TAAGCTAAGG GATTGTGGAG 2580
ACCAAGGTGT TTTTATGGTG CAGATGAAGC CTCCAGGTAG CAGGCTCCAG AGCTCTGATC 2640
AGACATGAAA AGGTGCCAGA CTGTTAGCTA ATTCTCTCCT GGATCAGGGA AAAGATCTGG 2700
GAAGGAAGGG GATTCTCTGC AGGATGCAGA TTTTCTCCAC CAGAGACAGC TTTTTAGGGC 2760
CATTTCAAAG TATGTCAAAG GAATGTACTT TGTGGTAAAA TACTTCAGTT TCTTCCAGGG 2820
CCTGCTATTT CTCGTGATGC TAGGCGAGAG TCAGGTTGGA ATTTGGTGTC TTATTGCTAT 2880
AAAGAGTCTG TTTGTCCTCC TTAAGTCTCT GTTTTAATGT TAATGCTGGT TAGCAGTGCT 2940
CGAATTCCGA AGGGAGGAGA GTATTATGAG GCATGTCTAG CCTGCTTTTC ATCATGGCCT 3000
GTGCTAGTTT TTCAGGTTTC TTTGGAATGC CCTTCACTGA CTATGGGTCG GGGGTCCATC 3060
AGCTTGGGGG CTTAGAATTT TATTTTTGGT TTATGAGCAA CACGCAATAA AAGTTGAACT 3120
TTTGGGTTAA AAATTAAAAT CTCTTGCAAT TTTATTAAGA ATAAATACTT TAAGAGAATT 3180
TTGTTCTAGC CAATTCTTTA GTGTATTAGT GCATTTTTTA ATTTTCTGAG ACAGAGTTTT 3240
GCTCTTGGCA TCCAGGCTGG AGTGCAGTGG CAGGATCTCA GCTCACTGTA ACCTCCACCT 3300
CCCAGGTTCA AGCAGTTCTC CTGCCTCATT CTCCTGAGTA GCTGGGATTA CAGGGGCCTG 3360
CCACCATACT CGGCTAATTT TTGTATTTTT AGTAGAGATG GGGTTTCACC ACATTGGCCA 3420
GGCCGTATTA GTGCATTTTT AATATCAAGG CCTAATCTGT AGAAAGACTA TTATACATAA 3480
TCTCCTTTTA 3490