EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-38350

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr3:49434990-49435450

Target genes

Number: 22
Name	Ensembl ID

ARIH2	ENSG00000177479
P4HTM	ENSG00000178467
RP13	ENSG00000223343
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
C3orf62	ENSG00000188315
USP4	ENSG00000114316
GPX1	ENSG00000233276
RHOA	ENSG00000235908
TCTA	ENSG00000145022
AMT	ENSG00000145020
NICN1	ENSG00000235261
DAG1	ENSG00000173402
BSN	ENSG00000164061

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr3:49435219-49435233	ACTCCCAAGGGACT	+	7.1
TFAP4	MA0691.1	chr3:49435273-49435283	AACAGCTGAT	+	6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_11376	chr3:49434389-49435974	CD20
SE_54109	chr3:49434857-49435692	Spleen

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I049397

chr3

49435021

49435150

Enhancer Sequence

TTATCTGCCT CAATAGCTTT CCCCTTCATA GTCACATGGC TGCCAGTTAT AAAGACTACA 60
TTTCCCAGCA TTCACTGCAG CTAGGTGGGG TATTAAGATC TGACCAACAG ACTGTATGCA 120
GAAAATGATG ATGCAGGAGA GCAGAGAACT GCTAGAGCAA CATTACGAGA TTAGAGGGGA 180
ACGAGATTTC GCTTGCAAGT GGAAGGGCTG ACCTTAGATA GAACAATGGA CTCCCAAGGG 240
ACTGATCCAC AGGAATAGAA AAATAAGTAA GAAGCAAGAT CATAACAGCT GATAGAGGCA 300
AGGAAAGGGA ACAGGAGATT TGAGCCAAAG GACATGGTGC TATATTATCC TAAAAGCAGG 360
AGAATAAACG GACTAAGGAA TCTTAGCGGG ACTGCTAGGC AGTGCTAAAA GCAGCCACCT 420
TTGAGGTCAA GGGTCCATGA GTTCAAAGAG AGACAAGTCA 460