EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-34013

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr2:231615670-231616280

Target genes

Number: 12
Name	Ensembl ID

SP100	ENSG00000067066
HMGB1P3	ENSG00000250011
TPM3P8	ENSG00000183022
CAB39	ENSG00000135932
AC084031.1	ENSG00000237758
ITM2C	ENSG00000135916
AC012507.4	ENSG00000230385
COX20P2	ENSG00000235013
GPR55	ENSG00000135898
PSMD1	ENSG00000173692
AC018738.2	ENSG00000237039
B3GNT7	ENSG00000156966

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6	MA0463.2	chr2:231615984-231616000	CAGCTGTCTAGGAATG	+	6.24
LMX1B	MA0703.2	chr2:231615740-231615751	GTTTTAATTAA	+	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH02I230750

chr2

231614925

231616430

Enhancer Sequence

CTTTAAATAA TTGTTCTGTA CTACCAGACA GATAGTCTAG CACTTAACAC AGTATCTGTA 60
AATAGTTATT GTTTTAATTA AGTAACATTA ACACTGGAAG CAAGGGATTA AGTCTTAGAG 120
CCAGTTATCT AAAAAGAATG TGTTCATGCA TGTACTACAT TTCACACTCC ATGACTGCTT 180
AAGAACCTTA ATAATCCTTG TAGGCAACTA TCTTATGATG TGTGGGGTTT TTTCTTTGTT 240
TGTGCTTTTT GTATTTGACC ACGAAGTTCG TGAGTCAGAT CTAACACATA TGTTAGTGTA 300
GAGTCTTGTG AGCTCAGCTG TCTAGGAATG TGTTGTCATT CAGCAGTTTT TCATTATTGT 360
CTCTAAACAC ATACGCCCAC ATCCATACAC ACCAGAATGT TGTCTTGAGA GCAGGCACTC 420
TTGATGCCTT AAGTTTGTGA CATATAGTAA ACACAGTTAG AAATGGAGTG AATGAATGTT 480
CTGCTGACTG GCTTATGGAC CTTTTGACTT ATGGACCTTT TGAGTTCTTT TCAGTATTTG 540
TCAATACATA GGTGAAGAGG AGTGTGTCAC ATAACGCAAA AGCAGTCAGA TCTCCAAAGA 600
TGGGCAGTAC 610