| Tag | Content |
|---|
EnhancerAtlas ID | HS134-27553 |
Organism | Homo sapiens |
Tissue/cell | Mesendoderm |
Coordinate | chr19:10989650-10990360 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF4G | MA0484.1 | chr19:10989892-10989907 | AGGGTGCAAAGGTCA | + | 6.73 | | Rxra | MA0512.2 | chr19:10989893-10989907 | GGGTGCAAAGGTCA | + | 6.11 | | Zfx | MA0146.2 | chr19:10989726-10989740 | CCCGCCTCGGCCTC | + | 6.01 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_23673 | chr19:10989663-10990407 | Colon_Crypt_1 | | SE_24532 | chr19:10989626-10990326 | Colon_Crypt_2 | | SE_48197 | chr19:10986275-10994537 | Psoas_Muscle | | SE_51520 | chr19:10985957-10990441 | Skeletal_Muscle | | SE_59598 | chr19:10974642-11000154 | Ly3 | | SE_68858 | chr19:10988600-10994414 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I010875 | chr19 | 10986311 | 10991186 |
|
Enhancer Sequence | TTTTGTATTT TTAGTAGAGA CGGGGTATCG CCACGTTGGC CAGGCTGTTC TCAAACTCCT 60
GACCTCAGGT GATCCACCCG CCTCGGCCTC CCAAAGTGCT GGGATTACAG GCCACTGCCC 120
CAGGCTGATC CTCCACCATT CTTAAGGTGA GGTCTTGTCC TCAGGTTTCA GCATGACTGC 180
TGGAGTCCCG CCATTACACC CTGGCTTCCA GACAGCAGGA CAGAGGAAGG GACAAAGGAG 240
AAAGGGTGCA AAGGTCACAT CCAGGTGTTT GTTAAGAAAG GTTCCCGGTA GCTGATGCAA 300
GGTGCTTCAG CTTTCATTTT GTTGGCTAGA ATGTAGTCAC ATGATCACTG CCAGCTGCAA 360
GGGATGCTGG GAAATGTAGT TTTCAATCTG AGCGGCCATG TGCTCAGCTG AATTTAGGGT 420
TCCAGTTTCC ATGGACAAAG AGAGAACATA CAGGGAGTCA CCTTGGCCAC AGTGGGTAGG 480
ATCTGGACCT GGCCAGAATG TTGGGAAGGA CGTTTCTGGG TTATGGAGAG GTGCTCCAGT 540
GGGCCAGGGC TGGAGACAGC CACCTGGCTT GGAGCACAGG GTCCCCTGTG AGGAGTGGAG 600
GGGCTAAAAG TGGAAACAGG GCTGGGTTGG AATCGAGGAT TTTTTTGGTT TTTTTGGAGA 660
TGAATTCTCG CCCTGTCACC CAGGCTGGAG CACAGTGGCT CAATGTCATC 710
|
