| Tag | Content |
|---|
EnhancerAtlas ID | HS134-13916 |
Organism | Homo sapiens |
Tissue/cell | Mesendoderm |
Coordinate | chr12:65062630-65064140 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr12:65063350-65063371 | ATTCAGTTTCTCTTTTTCTTT | + | 7.56 | | IRF9 | MA0653.1 | chr12:65062975-65062990 | AGTTTCTGTTTTGTT | - | 6.02 | | ZNF263 | MA0528.1 | chr12:65063578-65063599 | GGAGGAAAAGGAGCTGGAGGG | + | 6.25 | | Zfx | MA0146.2 | chr12:65062692-65062706 | CCCGCCTCGGCCTC | + | 6.01 |
|
| | Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
| SE_01804 | chr12:65062857-65064095 | Aorta | | SE_11789 | chr12:65048359-65079116 | CD20 | | SE_11913 | chr12:65058342-65070092 | CD3 | | SE_14822 | chr12:65058251-65070120 | CD4_Memory_Primary_7pool | | SE_15696 | chr12:65061649-65064764 | CD4_Memory_Primary_8pool | | SE_15988 | chr12:65062515-65064569 | CD4_Naive_Primary_7pool | | SE_16487 | chr12:65061093-65065642 | CD4_Naive_Primary_8pool | | SE_17278 | chr12:65061350-65064143 | CD4p_CD225int_CD127p_Tmem | | SE_18102 | chr12:65057726-65070402 | CD4p_CD25-_CD45ROp_Memory | | SE_18758 | chr12:65058416-65080356 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_20172 | chr12:65058509-65070241 | CD56 | | SE_21231 | chr12:65061300-65065883 | CD8_Memory_7pool | | SE_21679 | chr12:65061360-65065973 | CD8_Naive_7pool | | SE_22024 | chr12:65058680-65070332 | CD8_Naive_8pool | | SE_22370 | chr12:65057844-65080308 | CD8_primiary | | SE_26327 | chr12:65062514-65065978 | Duodenum_Smooth_Muscle | | SE_32113 | chr12:65062934-65064196 | Gastric | | SE_35199 | chr12:65062724-65070283 | HeLa | | SE_41405 | chr12:65059183-65065857 | Left_Ventricle | | SE_41811 | chr12:65062952-65063809 | LNCaP | | SE_41811 | chr12:65063848-65064135 | LNCaP | | SE_43200 | chr12:65062758-65065840 | Lung | | SE_49372 | chr12:65062833-65063696 | Right_Atrium | | SE_49372 | chr12:65063828-65064115 | Right_Atrium | | SE_50736 | chr12:65062629-65065852 | Sigmoid_Colon | | SE_54802 | chr12:65062503-65065859 | Stomach_Smooth_Muscle | | SE_57296 | chr12:65063275-65063655 | VACO_400 | | SE_59758 | chr12:65002038-65072203 | Ly4 | | SE_63011 | chr12:65051055-65082906 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I064664 | chr12 | 65058182 | 65079989 |
|
Enhancer Sequence | TTTTGTATTT TTAGTAGAGA TGGGGTTTCA CCGTGGTCTC GATCTCCTGA CCTCGTGATC 60
TGCCCGCCTC GGCCTCCCAA AGTGCTGGGA TTACAGGTGT GAGCTACCGC ACCCAGCCCA 120
ATTTTGATTT TTTAGGAGGA AAAAAAATTG TTCCTAAGGA AGTCAAGTCC TAAATTGAAA 180
GACTTTCATA TATTACACAA ACCCTAGAAA AACTTGGGTT ACACCTGGGA TTGATTTTGA 240
AGTAGGGCGT TGAACTATGT GTCCTGTTTA ACCTCGAGGA GCAAATGGCT TTCCATTCTA 300
AACATTCTCA TTTCTTCTCT GGGACATTCT TTAGGTGCTT GTTTGAGTTT CTGTTTTGTT 360
AGGCACATTA GAGGACTCTA TATGAACAAG TTCCTAGGGG AGGAAATTGG TGACTTAGAT 420
GAAAGGGTGA AAAAGGTGAA ACCTTCACAT TATTGTGTAA GGGATTGTCC CAGAATGTGT 480
GAAATTTGAT GTAGTCCTTC TTGGCTTCGT TTTTTCCTCA GATGTTCTGG ATGAAACAGT 540
TCCCCCTGTC ACACGTGGAG ATAAGGATGT GGCTCTAGGC AGGGCATATC CTGTGTTTAA 600
GACTGTGTTG ACTCTTCTTT TACAGTGTCT GCCACTTGTT TCCTGCCTAG GTCTTTAGTT 660
TTGAGTGAAG TACAGCTGTG AAGTCCTAGA CTTGTAATGC TAAGGCGTTC ATTATGTTAA 720
ATTCAGTTTC TCTTTTTCTT TTCTCTGCTT CACATCAGCC TTGTACTTTA GCACGTTTCC 780
AGTCCAGCCT TGGTAGCTGG GCTGCTGTTC TCCTTGACCC GTCCCTTTGC AAGCAGCAGA 840
CCACGGCCAG GGTTGGGAGT CCGGCTGGGC CACTGACCGC AGTGCTGAGG AAAGGTGGAG 900
CGGGAGGCCC TTTCCTCCCA GCCTCGGGCT TCCTGTGCAA GCCACTGAGG AGGAAAAGGA 960
GCTGGAGGGT GTGTGAACCC TCAGGTTATA CAAGCAGCAC TTCTATGCAA CAAAGAAAAT 1020
GTAAATTGCT GTAAATTACC AAAAAAAAAA AAAAAAAAAA AATTGCTGGC AATCTGCTTT 1080
CCAGGGCAGA TGGAGGGTAG CTTTTATTTA TACATTGGTC AGCTGATTGA GTAATGTTTA 1140
AAAACCACCT TTACTTCTGG CACTTCTTGG CAGTATCAGT TTTTTTTTTT TAATGGATAG 1200
AGAAGCTTTT TTATTTTACA GATAATAACT GCATATCTTT ACCTGAGGGA GCTCAGGTTC 1260
GCTCTATCTA GCAGCTTCCA CGTGTCATCT CTGTATGTGC AGTTGGTGCC TGCATTAAGG 1320
AGGACGGACA GCCTTGTGGC GTTGGTGCCT CTGTTTTGTG TCTAAAGCTA TTTATTTGGG 1380
GGTGGCTGCC CCAGGAGCAG CACATCAAAG TGGTGTTCAG TTATGCTGGC CAAGTGCTGA 1440
ATTGCATTGT GTTTATTTTT ATTTCCAAGG TTATTTTATT TTTTACACAT GAAAGCCTTT 1500
TTCCCTCCTA 1510
|
