EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-05420

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:234365160-234367160

Target genes

Number: 5
Name	Ensembl ID

RP11	ENSG00000225486
RP4	ENSG00000233332
RP5	ENSG00000235605
C1orf31	ENSG00000168275
IRF2BP2	ENSG00000168264

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf12	MA0742.1	chr1:234367139-234367154	AACCACGCCCTTCTC	+	6.03
Myog	MA0500.1	chr1:234365502-234365513	AACAGCTGCAG	+	6.02
Tcf12	MA0521.1	chr1:234365502-234365513	AACAGCTGCAG	+	6.62

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I234230	chr1	234366401	234366550
GH01I234231	chr1	234366747	234366946

Enhancer Sequence

AAATCCATAG AAACATTTTA GCAATACCAA ATTACATGAT TTGATGATTT TCTCCTTCAT 60
TGTAAAAGCT ATGCAGCATC ACTGCCTAGT TTGCTAAGTT TTAAAGCTTA ATTTGCTATA 120
ATGAAAACAT TCAATGAAGA AACATGCTGT GAGCTGAATT TATTCAGCCT CTTTTGGAGT 180
CCATTCTTTC ACTGGAAGTT ATTACTGTGA AGCTGCATTT TATTTTTGTG AACTTTTTTT 240
TCATCTCTAC AATCATCTTT TCAGGATGAG TTTTTGACAG TGATGCTAAT AGTGACAAAC 300
CCCTCTAACC TCCAACACTC CTTGCAAATT ATCCCGATAA TGAACAGCTG CAGATGTTAA 360
TTCAAAATGG CAGGTAATCC GTGTGTAAAT TGAAATGTGC ATGCTTCTGT CTGAAACTGC 420
AATTGCATTA AGTTGTGGAA ATTCACGGTG AGGAAAGTCA AGAGATCCTG GTAGGAGGGC 480
ATAAGCGCGC AGATCCCCCA AAAGGCTGGA AATCAATCTT CCTTTTTGTC CTCCACATCT 540
TTCTGCCCTG CAGCCCATGC AGGAACAGAC GGCTTGTCAG AAGCTCAGAG GGTGGCGAGA 600
CATTTGGTTT TCCAGGGGCT TTTCAACTTG GATATGTGAG CACATGAAAA GTTAGAGAAG 660
GAGGGAGGTT ATTAATAAAG CAAGTAATGA AGCACAATAG AGATGGTGTG AAACAGTTTG 720
GCCCAATAAA GTACATTATC TCTCTTTGAC TAACCATGTA ATGCTTCGGT TTATCTTTGG 780
CTAAAACAGA TACAGCACAG CTGGTGGTTA ACGATATTAG CTAACACCTG AAAAATAGAT 840
TACATTGAAT CACAATTTTG CCTCATAGAC TCATAATGCT TCAGAAAGTA TGATATACAA 900
AACTCAGTTT GTTATTAAAG TTATTTAAGT TTAAGCAATG TAGAGAAAGC ACGTTTGACC 960
CCAATATATT CAGGACTCAT CTCCTCCCCT AGAGTGAAAA TGGCCTCTTA GCACTAATGT 1020
GCCTCCATTC AGCTAGGTGC CAGGCACAAC ATCATTATAA AAGGCAAGTA CACTGCCTTC 1080
TGGAAATTTG CATCCATCCG TAGTTACACC CGACACAAGC TACAGCTTTG TTTAAATTTC 1140
CAGCTGACTG ACACGCACAC AATCATGAAT GAAAAAGCAA ACAGTGGAAA ATAACGCCTT 1200
TTCACCTTCC TCTGGTCTGC GGGAACAACA CTGCCGCAGA GCCAAGCTTT GGGCTGCAGC 1260
CTGGTTTCCA GAAATCACAC CGCTCTAGAA TGGAGTGTCT GTGGCCTTTC ACACACCAGC 1320
TGCCAGAGGT TGTGGTTTTT AAGTAAAGCT TCGAAGTGGG ACTGGAGGCT ATCAGCAGGA 1380
AGCCAGTTAA AGCAGATAGA AAAGTAAGAG TGGCGAAGTC TATTTTTGCT GTACGTACAA 1440
AATAAGAGGA GAGAGTCTTG GCCAACTGTG CCTTTAAGTA ACAGGCCACT TCTGTCAAGG 1500
TACTGGGACC TTTTAGAGGT CAGGACCTCC CCCTGTAGGA ATCTCCAGCC CCCAGTACTG 1560
CCCCGCACCC AGGAGCACGT GAGTACTCGT CAACTGACAT AAATGAGAGT GGAGATATTT 1620
CAGCTGCTCT GTGTGTTCTG GAGGAGTGTT TCCCAAAGCA CGCAGATCAC CTGAGGAATG 1680
CAGGTTCTGA TTTTGGAGTC TGGGGTGAGC CCTGAGATTC TGCATTTCCA ACACGTTCCG 1740
GGGACGGACG GGGAAGGGTG CTGACGCTGC CCGGCCCAGG GACCACACTT GGAGAGCCTC 1800
GGACCTGGAG GACAGGAAAA CCAGTGCAAA CGTTTTCTAT TGCAGCTTGC TGTCACACAG 1860
CCGCCCTGGA AGCCGCCCCT GCACCCGCTA TCTCCCCGGG CCCCCAGGTA GCTGGTGGTG 1920
ACAATGGCTG CAGGGCAGCG CCCTGCGAAG TGCAGGGGTG AAGGTCTGCA GGCCCCGCTA 1980
ACCACGCCCT TCTCTTCCCC 2000