EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-04118

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:184664230-184666110

Target genes

Number: 5
Name	Ensembl ID

TSEN15	ENSG00000198860
C1orf21	ENSG00000116667
GS1	ENSG00000232036
EDEM3	ENSG00000116406
RNF2	ENSG00000121481

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata1	MA0035.3	chr1:184664554-184664565	AGAGATAAGGA	-	6.02
SOX10	MA0442.2	chr1:184664963-184664974	AAAACAAAGGA	+	6.32
Sox3	MA0514.1	chr1:184664963-184664973	AAAACAAAGG	-	6.02
Spz1	MA0111.1	chr1:184665593-184665604	GCTGTAACCCT	-	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I184695

chr1

184664783

184666086

Enhancer Sequence

GGAAGGCTGA AGAGTGAGTT AAACCTCTTA TAATGAATAT ACAGTGAAAC CAGTAGAGGC 60
ATTTTATTTA GGGTTCCTAC AAGAAAGTGC TTAAATAGCA TCGACGCCTA CATGCTACAT 120
CCTGTTCAGT CTCTGCCTCT GTGATGCAGT TGGCCAGCAA ATATCCTCCA AGTCATCATT 180
TGCATAGTGC TAGGGATAAA ATGAGGAGCA ATACCAAATG CTATACCTGC CCTTATGGGT 240
CTTATAGTCC AACGGGAGAA AAAGATATTA TACAAATAAT CACGGAAAAT AAATAGAAAA 300
CTCAACTGTG ACACGTTATG AAAGAGAGAT AAGGATTTTG GATGCTCAAG TCCCTTATGT 360
AAAATGACAC AGTATTTGCA TATAACTGAC ACACATCCTC CCATGTACTT TAAATCATCT 420
CTTGATTACT TTATAATACC TAATACAACG TAAATGTTAT GCAAATCATT GGTATACTGT 480
ATTGTTTGGA GAATAATGAC AAGAAAAAAA ATCTCTGTAT GTTCAATACA GATGCTTTTT 540
TCTTCTTGAA TATTTCCTAT CCACAGTTGG TTGAATCCAT GGGTGCAGAA CCCACAGATA 600
CAGAGGGAGA ACTGTAAGGA GATTTGAGAA GTTTCTTCAA AAAGTTCCTT CAGAAAGTGA 660
CACTTGAGCT GGGGTTTAAA GTATAAGATA ATGTCAAAGA AGGGAGGGAA GAGGATTTAT 720
TTAAAAACCA GAAAAAACAA AGGAAATGTA GACATGCAGG AAGGTGTGGT GGGTATTGCT 780
GGGGCACAGA AAACAATTCC CCAAAATATG GTGCTTCAGC ATGATGAATG CTTGGAAAAC 840
TGAAAGGTCT CAGAAATAAG CCTCAGAACC AGTCTGTCTC TGACCTTCCC CTGCCTCCCT 900
GTCTCTCTGA TCCTCTTTCC TGAAGCAACT GGGGGGATTC TCTCTGGAAT TTTCTTATCT 960
AAGGAAGCTT CTTTCCAAAT GAAATGCAAT TGTCTCAAGA ATCCCTCCCT AGGACTCTCA 1020
TCAAATAACG AGAAAAAAAA TGAGCCATCA GAGAAGAGTA GAGACAGGGG TCCTCACCAC 1080
ACCCAAACAG ACTTTTCTTC TGTTCTTCTG AGGACAGCTG AGAGATTAAC TGGGGGACTT 1140
TATCTAGATA CTATGCAAAG AGAATCCTTT ACCAATCATT GTCTAAGCAC TGGACCTCTT 1200
CATTCCCTAG TATTCCTCTA CCCTAAGAAG AGGGTATTTA AGCTTCAACC ACCTGTCCCC 1260
TTTCATATTT TGTATGGCTC CTGTGCACAC ACGTACACAT AATAAAATTA TTATGCTTTT 1320
CTGTTGTTAA CCTGTTTTTG TTTTTTTTTA ACCCGGGGTG TCCGCTGTAA CCCTTTATGA 1380
TGGGGAGGAA AGGATCACCC CTTTCTGCCC CTACAATGCA TATATGTTCA CCCTGATTAG 1440
ATGGGATTAC TTGACTCTGA AAGTTTACAT TCTTAGGGTT TTTTTTCCGG AGGGGAGGAT 1500
CAGCAGGGGG TGGATTGAGG AATTCCACAC AATCTCTGTC TTCTAAGCTG TGAAAAAGGT 1560
ACAATTTAAT TAGGCAATTA GGGAAACCAA TGGTGCAGAC CAAAGAAAGA AGGTAGCTGG 1620
CTACTTACAG CTTATTTATC CTAGGTTCCC TAAATTCAAG AGAGAACAAA AAGAAAAATC 1680
TCCAAGTTTC TTTCTAGATT GTATTATTCC AGATTAGAAG GAGAGGAAAA GGTGTAGGGT 1740
TGTTTTACCT GGTAATGAAG ATTGTGCTTG TGATAAAAAA CTCTCCTAGG GTTACATATA 1800
CGATATTATT TTGGAAATCT AGCTGATGTA ATCGGACAAG AAAGTAGAAT AATCAATGTA 1860
AATATAGAAA AAGATCAAAT 1880