EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-02805

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:111905850-111907960

Target genes

Number: 5
Name	Ensembl ID

LRIF1	ENSG00000121931
C1orf88	ENSG00000173947
WDR77	ENSG00000116455
RAP1A	ENSG00000116473
DDX20	ENSG00000064703

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NOTO	MA0710.1	chr1:111906579-111906589	GCTAATTAGC	+	6.02
NOTO	MA0710.1	chr1:111906579-111906589	GCTAATTAGC	-	6.02
TP53	MA0106.3	chr1:111907567-111907585	GGCATGTCTGGGCATGTA	+	7.22
TP53	MA0106.3	chr1:111907567-111907585	GGCATGTCTGGGCATGTA	-	7.71
ZNF263	MA0528.1	chr1:111907605-111907626	AGAGGAGAAAAGGGAAAGGGG	+	6.15

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I111364

chr1

111906956

111907862

Enhancer Sequence

TATATCATTT TTCAGGAGAA ATTGATAATG AGGATTGCTA TTATAAAGAT TCTGCATGGC 60
CTTAAATCTT AGTCTTCTTC TTCCCAAAGC CTACCACAAT GACCATTTAA AGGAGCCACC 120
ATCTTATCCC AAAGCCACCA AGTCCTCAAG TCTGTTTGGC ATTGGACACT AGTTTTTCCA 180
ACACTACACT TACAGCACTG CTTGGGATGC TGTCCACCAA AAAGTTTAGA AATCTCTGCT 240
CTGGGATTTG GGGACCCCTG AGAGACACAC TGCACTCACT TCTTGATCTC TGAAATTTCA 300
TATCCTGCAT CAATGGTCTC CTTGCCAGCA GATATAGCTG CTGTGATACG CAGCCTGGGG 360
TGTCCTGTTC CTTTAGCCTC TTCTTCAAAA GCCTCCAGCA TTTCCTACAG AGAGAGTGAG 420
GGTGGATTTG AGTGGCTGTC TTTATTATCT ATTTTCTACA GTAAGCACCT CTTAGGCTTC 480
TTTCCAGCTC CTAGCAATTC CCCTTTTCTA GAAATAGTCC CCAATATACA GGTATGGGTC 540
TTGATAAAGT ATAACTTGGA ACAAAGAGAT ACTACACATA CTAGTTGTCC TAGGGTCCAA 600
GTTACAGTTA ATGGCAATTC CAAAGAAAAA AACTAGGACC TCCTGGCAGA GTTCACTCTT 660
CCTTCTAAAG TGCTAAACTT TTTGGATTTG TCGATAGCCA TGCTAAGCTC TTTCTGCCCC 720
CAAGCTTTTG CTAATTAGCC ACGGAAAGGT TTTTCCTGCC TCCAGGCTTT TGCTAATGCT 780
GTTCCAACTT CCTTAGAACA ATTTTCTCCC TATTCTTTTT GTGGCTGGTT GCTGTTAATT 840
ATTCATATCA CAGCTTAAAT GTCACTTCCT CAGAGAAGAC TTCCCTGACC ATCCTATTTG 900
CTTCCATCAT AGCTCTTATC ACAACTTATG ATTATTTGAT ACTTTTTTGG AGTCTGTATC 960
CTCTTTGCAA GCCCCACGAG AGCAAGGATC ATGTTTCTGT CATTAACTGC CCTAGCTACA 1020
GTGTGAAGCA CAGTGCCTAG ATGACAGTAG ATGCTCAATA AACATTTACT GAATGAACGA 1080
CTGAGATAAT GAACAGTTCC TCCTTCCCAG TCCAAGGATT TCTCCCTTGT GTTTCTTCAG 1140
ATACCTATAT CTTTCCAATA ATTCCCTTTG GGCTTACACT AACCAAAGAG TCTGTTTCTA 1200
TCGCTTGCAA CTCCCAAACA CCTTAACTCG TGTACTGCCT GAGGGCAACA TCCTTTGCTA 1260
TCCCCAGGAA ATTCAGCCCT TACAGAAAAT CCATTAAGGT ACAAGCTTCT CTACAAGACG 1320
ACACAGAGCT GGTGCTCCAT TCTGTTGGAA ATAATGCTCA AAATCCTAAG GAAATTAAAC 1380
ACTCAAACAA AGGATTTTCA GCGAAGCAAT TTTACTTCTG CGCAAAGAGG TGCTTCTGCT 1440
TGTGCAGTCG CCATGAGAGC ACACCTGAAC AAAGGGGCGC GAGGGCCTTT ATTCCTGATG 1500
CAAGCACTGC CCCTGTGCCC TTTCCCCATT AGCCAAAGTC GAGCCACACA ATCTAAACTA 1560
CTCCTGGTTG GCTAAACATT TGAACTTTCT TTAGATAAGG TGGGCACCTC AGGGAGAGAG 1620
GGGAAAGGGA CGGGGTGTCT GCAGTGAGCT AGAGAGCTAG TCTTCTTTCC AAATAAGGAA 1680
AGGAATGTGA GCTGGTACTG ATAACACTTG GTACTGTGGC ATGTCTGGGC ATGTAACAAA 1740
GGCAGAAAGG AAGAAAGAGG AGAAAAGGGA AAGGGGGTAC TATGAATTAA AGAATAAAGG 1800
ATTGATCAGG CTGTTTGAAG AGAAACCTCA TCATATCCCA CAATTCCCAG CTTAACCAGG 1860
ATGGTAAATT ACTGTTTGTC CTCAGGTGGG CTTCCCTGAG ACCCTGGATA TTTGATATTC 1920
AGGTCAATGC CATCAAATCC ACGTTGGCGA AAGAAGTCAA TGACAGAACA GTTGAAAATC 1980
TTGTGATTGG CATCTGTGGC ACCAATGGTT ATGAATATAG GCAGAGAGCT TGTCTATATT 2040
AACATTAACA GACCCCAGGA ATTCTCCCCA CATGATCTCT GATAGCAATT CTTATTCTGT 2100
ATTTTATAAT 2110