EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-02083

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:78443770-78444560

Target genes

Number: 6
Name	Ensembl ID

USP33	ENSG00000077254
FAM73A	ENSG00000180488
NEXN	ENSG00000162614
FUBP1	ENSG00000162613
DNAJB4	ENSG00000162616
GIPC2	ENSG00000137960

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_13760	chr1:78442270-78446554	CD34_Primary_RO01536
SE_14888	chr1:78440854-78446748	CD4_Memory_Primary_7pool
SE_18555	chr1:78439946-78447087	CD4p_CD25-_Il17-_PMAstim_Th
SE_19704	chr1:78440503-78446337	CD4p_CD25-_Il17p_PMAstim_Th17
SE_21141	chr1:78441202-78446868	CD8_Memory_7pool
SE_21684	chr1:78442308-78446105	CD8_Naive_7pool
SE_22645	chr1:78440827-78446362	CD8_primiary
SE_35273	chr1:78442114-78446661	HeLa
SE_36446	chr1:78442383-78446764	HMEC

Enhancer Sequence

AAATATATTA GGGGACTATC TAAGAATGTA AAGTTCAAAT TAAGGTATCT TTTATTTTCC 60
TGGAATACAC GCACTATTTT AACAGCTTTC GTCTGGGAAA GTGGTGCCTT CAGGGCAAAT 120
GCACGCACTA CGTAATACAA AGAGGTCTGG TCAGTTTACG ACTCTGAACT GAGAGGCAGA 180
TTCAAATTGA AACCTCTGGT ATAATGGGCC TGAGGCCATT TTGAGAAATA AGGGGGGCGG 240
ACTGGTGGAA CAGACTGACA CGTAAATCCC GCCCAGAAAA AGGCTGCTTT CAAGTCCCTT 300
CCTTGTAGAG GTGTGACGGT GAATGGTACT GAAAGCGGTT TTAATTGCGA GAGAGAACGG 360
AAATGAGCTG TAAAGGCTAC TTTAATGATA AATCCCTTCC CTTGCTATGG CTCCAGGACA 420
GACCCTAGTT CTTTCCCAAA CTCATTACCA GAACCTTCCA TTAAATTGTG TGAAACTAAC 480
TGCGCTTTAT CCCCTGGAAG AGGATCTTTA TCTAAACTAG CTCACTGGAG ACACGCGAGT 540
GCCGCAGAAG CGGGAGAAAG ACTTCAGGCC TTCTTTGCGT AGCACGCGTC GGGGTTCTAA 600
GTGGATTAGG CACCAAGAAC ACAAAACTGG GTTCTGGTCT CTAATCGTTA TTACCAACAT 660
GGGGAAACGT GTCTCTTCAC ATTTCAGCCC GGAAGAACAC CTCTTTCCTC TTCCTCATGC 720
GCTTAAGGGT AGCGGCCTAC TCAGTCAGCG GCCAATTACC GTGAGCTTTC GGGATTCCGC 780
CGCGCGGTCC 790