EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-01350

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:53139800-53141420

Target genes

Number: 12
Name	Ensembl ID

RP4	ENSG00000228407
ANAPC10P1	ENSG00000213735
PLA2G12AP1	ENSG00000224680
PRPF38A	ENSG00000134748
ZCCHC11	ENSG00000134744
GPX7	ENSG00000116157
FAM159A	ENSG00000182183
SELRC1	ENSG00000162377
ZYG11B	ENSG00000162378
RP11	ENSG00000228929
ZYG11A	ENSG00000203995
SCP2	ENSG00000116171

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:53140230-53140245	TGAACTCTTGACCTC	-	7.64
RARA	MA0729.1	chr1:53140227-53140245	TCTTGAACTCTTGACCTC	-	6.45

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I052674

chr1

53139988

53145692

Enhancer Sequence

CCAAAGTGCT GAGATTACAG AGCCACTGTG CCTGGCCATT CTTCACAATA ATTTAATCCT 60
GTGAGAGAGA CGTATTATTC TTATCCTCAT TTTCCAGATG ATGAAACTAA GACACAGAGA 120
GGCCAAGTAA CTTGCCCCAG CTCACACAGC TAATAAGCAG TAGAGCAATA TGGCTCCAGA 180
AACTATGTTC TTCTTGACCA CTCTCAATAT TTTCTTTTTA TTTTTTTGAG ACAGAGTCTC 240
GCTCTGTTGC CCAGGCTAGA GTGCAGTGGT GCCATCTCAG CTCACTGCAA CCTCCACCTC 300
CTGGGTTCAA GTAATCCTCC TGCCTCAGCC TCTCGTCTAC CTGAGATTAC AGGCGTGTGC 360
TACCACGCCC GGCTAATTTT TTGTATTTTT AATAGGGACG GGGGTTTCAC CATGTTGGTT 420
AGGCTGGTCT TGAACTCTTG ACCTCAGATG ATCTGCCTGC CTTCACCTCC AAAGTGCTGG 480
GATTACAGGT GTGAGCCACC ATGCCCAGCC TATCCTCCAT ATTTTCAATG ACGTGTTTAG 540
CACAGCTCCT TGCACACGGT AAGCACTCAA TGTCAGTTGC CAGTAAGATG ATTACATTTT 600
CAACAGCTTT ATTGAGGTAT ATTTTATGTA TTATGATTAC ATTTTGACTG TTAGGAAAAT 660
CTTTCTGACA CTGAGTTAAA ATCCCCCTCA GACCATGCCC CTCCTCCATG GGTTCCAATT 720
CTATCCCCAG AATCTCCTTA GAGCCTTGCC TTGTTACAGT CTCTTAGGGA TTTGCAGTTA 780
CAGGCCAAAC CTGTCTGGTG GGGCTTAGTC TGGCTTCCTT CCTGTCTGTT GGTGACTCAG 840
CCATTGGTTG ATGGATTGAC AAGCCTCTGA TAAGTCCCAG GAGCACTGCA GGTCGGGGGC 900
TGCTGCCTCC TACCCCAGAG CCCAACAGCT ACATAAATAA ACTACATAAT TTGCAGGGTC 960
CAGTGCAAAG TGAAAATGCA GGGCTCCTTG TTCAACATTG TTAAGAATTT CAAGACAGTG 1020
ATAGTAGAGG CTTAAACCCG GCATGGGGCC CTTGCAAATG TGCAGGACTC ACATCCATGA 1080
ATCAGCCCTA GCAGCATCCT GTATCTTCAG TTCTTCATCA CCTCATCCCA CCACCATCCC 1140
ATCCCACCAT GTGCTCATGT GGAGGCTGAG CCTGGGAAGT TCCTGGTACA CCAGAGAAAC 1200
ACAGAAAACA TTTAGCACCA AGAGAGTTAC AGCTCACTTG TGCCCTCAAG TCCATCAATT 1260
AACTGTAAGT CTGCCTTGAA CCTCACTGGC TATAAGATTC AGGCTGTCCA CCGTCTCTCG 1320
GGCCCCTTTT GTCAGAGGCA GCCCTCTAGG TTTGGTGGAT TAGTGGTACA AACACCAGAC 1380
TAAGAGTTGG GACCTTCCAT TGCCTTCCTG AGGACACTCT CATGTGTCTC TTAGAAACAC 1440
AAGATTTGAT GCTCTCAAAT CTTGATACAG AGTTTCACTC TTGTCTCCCA GGCTGGAGTG 1500
CAATGGTGTG ATCTCCCCTC ACTGCAACCT CCGCCTCCCA AGTTCAAGCG ATTCTCCTGC 1560
CTCAGCCTCC CGAGTAGCTG CGATCACAGG CACCCACCAC CGTGCCTGGC TAATTTTTGT 1620