EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-01162

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:44727200-44727840

Target genes

Number: 12
Name	Ensembl ID

SHMT1P1	ENSG00000224751
ARTN	ENSG00000117407
IPO13	ENSG00000117408
DPH2	ENSG00000132768
ATP6V0B	ENSG00000117410
B4GALT2	ENSG00000117411
CCDC24	ENSG00000159214
SLC6A9	ENSG00000196517
RP11	ENSG00000233514
DMAP1	ENSG00000178028
ERI3	ENSG00000233602
TMEM53	ENSG00000126106

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_23389	chr1:44724791-44729912	Colon_Crypt_1
SE_24224	chr1:44725698-44728686	Colon_Crypt_2
SE_50790	chr1:44725562-44730001	Sigmoid_Colon

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I044261

chr1

44726847

44728319

Enhancer Sequence

AGAGAGCTGA GAAAGAGGAG AGGGAAAAAA GGAGAGCGAA CGAGAGCAGG CAGCGGCCAG 60
AGACTGCAGC TACCTTAGAG AGCCGCTCTG AGGAGAGCTG GCGGCTGCGC CCCGCTATGC 120
GCTCCGCTCC GTCCCCAAAG AGAAAGAAAG GCTCGTTAAC AGCTCCTTCC TGCCTGCACT 180
TTTGTTCAAA TTCTTTTCTT CCCTTCCAAT CCTGCTTTAG GTCAAATTCC AGTGAAAATG 240
AGTCTCCTGG CTTTCCCATC TACTCCCAGC TTCCCAACCA GGCCCAGGAA CCCACCTGGC 300
CCTTGGCAGA AGGGCTGGGT ATGGGTACAA GACAGGGCTG GGAATGGGTG TGGCAAAAGC 360
ATGCCTAAAG CTTTCCCAGA GCTGTTCTCC TAACCTAAAA CCTCACCCTT TTCCTGCTCT 420
TTCAGCAGAA CAGGAAGGGA ACAGAGTAGA GGGAGGATCT GCTTGGGGTC GTTCCCGAAG 480
GCTCTGTCCT CACATCTTTC CAACCTTAGG CTCCAGACAG TGCAATCCAA GGCCCTCCAC 540
CCACCGCAGC CCAGCCAGAT GGTGAAAGTA GGTGTCCCTC AGGCTCGCTA AAGCAGAAGT 600
TGGTCCATGT CTCCATATTA TAATGGAGAA GTGTGACAAG 640