EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-01122

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:43750450-43751110

Target genes

Number: 19
Name	Ensembl ID

YBX1	ENSG00000065978
CCDC23	ENSG00000177868
ZNF691	ENSG00000164011
RP11	ENSG00000237090
ATP6V1E1P1	ENSG00000225099
SLC2A1	ENSG00000117394
RP5	ENSG00000227533
FAM183A	ENSG00000186973
WDR65	ENSG00000243710
EBNA1BP2	ENSG00000117395
C1orf210	ENSG00000253313
TIE1	ENSG00000066056
RP1	ENSG00000234694
ELOVL1	ENSG00000066322
MED8	ENSG00000159479
SZT2	ENSG00000198198
PTPRF	ENSG00000142949
KDM4A	ENSG00000066135
ST3GAL3	ENSG00000126091

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf12	MA0742.1	chr1:43750480-43750495	GGCCACGCCCTCCTC	+	6.74
SP4	MA0685.1	chr1:43750478-43750495	CTGGCCACGCCCTCCTC	+	6.06

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_29457	chr1:43748843-43752786	Fetal_Intestine_Large
SE_31961	chr1:43749328-43752683	Gastric

Enhancer Sequence

TCCTCCCACT CACCCACCCT CCTGCTCCCT GGCCACGCCC TCCTCAGTTT TTGGGGCGCC 60
AGTCTGTCAA GGCCAAATCA GACCATACCT GCCTGTGAGG TTGTCCCTGG ACCTACCCTG 120
GATGACCTGT CACCATCCTG CCCAGTCAAC CACCAGTCAG AACCAGTCAT TGCTAGGCGG 180
GCAGCTCCCC GTGGGCAACG GCTGGCTGAA GGATCTGTAC CCTGGCGCTG CAGGGAGCTG 240
GGCGTTCAGC CCCTCAGTGT GGTGCTTGTG AAATTAACGA GGGGAGCGTG AGAGTGAATA 300
TACAGGTGGG AGCGGGAGAG ACGTCCTGGG AAGGAGAGGT CAGCTGCTCA TTCATTCCTC 360
AGCCTGCTGT GGGCCTCATC CTAGTACTAG GTCCGCAAAA CATGAGAATG TGTTACACTG 420
GAATGAACTG AATTCAATTT GACGTTTCTA AGGTTGTATT CCTATTCCTT TCCTCCCTGC 480
CCTGTGAATT CTTCCCAAGA AGACACACAC ACACTAACCT TCCAAGGGTG CATATACACT 540
CCCCAACAGG CCTCTGAACT CACAGCCCAC ACTGATCTGC CCATCCCCCA TACGCACAGC 600
CCCTCCCCCC AGGTCACACT TTCCTCCACC AACAAACACC CCTCTGACAT GCACAGACAC 660