EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-01004

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:39582960-39583310

Target genes

Number: 14
Name	Ensembl ID

RP11	ENSG00000215895
RRAGC	ENSG00000116954
MYCBP	ENSG00000214114
GJA9	ENSG00000131233
RHBDL2	ENSG00000158315
AKIRIN1	ENSG00000174574
NDUFS5	ENSG00000168653
MACF1	ENSG00000127603
KIAA0754	ENSG00000255103
BMP8A	ENSG00000183682
OXCT2P1	ENSG00000237624
PABPC4	ENSG00000090621
PPIE	ENSG00000084072
RP1	ENSG00000225333

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_00416	chr1:39582226-39584408	Adipose_Nuclei
SE_25799	chr1:39580248-39583469	Duodenum_Smooth_Muscle
SE_32006	chr1:39582806-39583395	Gastric
SE_35822	chr1:39578065-39583403	HMEC
SE_36947	chr1:39579990-39583677	HSMMtube
SE_37973	chr1:39581967-39584097	HUVEC
SE_42256	chr1:39582891-39583417	Lung
SE_45768	chr1:39583174-39584474	Osteoblasts
SE_47164	chr1:39581638-39583573	Panc1
SE_54583	chr1:39582631-39584292	Stomach_Smooth_Muscle
SE_64261	chr1:39580108-39583689	NHEK

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I039114

chr1

39580359

39584518

Enhancer Sequence

CTCAGAATTG ATGTAGTTCT TTCCCATTGG CACATTCCGC ATCTTTGTTT GTTTATTGCC 60
ATGTTCGCCA CAGTGTGCCT TGTTTTGCGC TCCTTGTTTT GTGAAGCTGG ACTCTTATCA 120
GATAAACTTG CCATGAGTCA CACTGGGGAG TGGAAGTATG TCTCCACTAA TTTGGAGAAT 180
CTTTGATCTT GTTTCACTCC CTGGTTTGGC TTGTCCAGTG CAATTTGTCT CTCAACCTGC 240
AAGAGGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTA CTTGGGTGTC CCTTGCCTGT 300
GGCTTCACCT GTTGCCATGA ATGGTTGACT TCAGGGCATG CCCCTTTGTG 350