EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-00739

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:29497550-29497900

Target genes

Number: 10
Name	Ensembl ID

SNHG12	ENSG00000197989
YTHDF2	ENSG00000198492
RP1	ENSG00000226852
EPB41	ENSG00000159023
RP4	ENSG00000225616
TMEM200B	ENSG00000253304
SRSF4	ENSG00000116350
RP11	ENSG00000237934
MECR	ENSG00000116353
PTPRU	ENSG00000060656

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_00764	chr1:29495615-29499167	Adipose_Nuclei
SE_13923	chr1:29496651-29498077	CD34_Primary_RO01536
SE_15219	chr1:29497257-29498764	CD4_Memory_Primary_7pool

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I029171

chr1

29497258

29498764

Enhancer Sequence

TCTAATCCCT CACCTTCAGG GTACTATAAG ACCAGACGGC CCTAGGAATG ACAATAAGGC 60
AGAGAACATT TACTTGTACA AATCCTTCCT CAGCCAACCA CGATAAAGCT GATACCACCT 120
TACAGCTTTT CAAAGAGTAG CCTGAGGAGG AGAATCACTA GCAGTCTCCA ACTAAGGACA 180
ACATCATAAA AAATACCATC TGTCTCACTT TTGGCAGTAA CTTGTCAGCT TGCTGGAAGC 240
CTCTACAGAG ACTAAAGGCT GAACAAGCCC GGAAACCTGA ACTACCCTCT CACCCTCAGA 300
GGCAATCCCC AAAGGACAGG ACTAAAGGAA ATAGCATGAG GGAAGCTTTG 350