EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-00672

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:27446000-27446530

Target genes

Number: 17
Name	Ensembl ID

HMGN2	ENSG00000198830
RPS6KA1	ENSG00000117676
ARID1A	ENSG00000117713
PIGV	ENSG00000060642
ZDHHC18	ENSG00000204160
SFN	ENSG00000175793
RP1	ENSG00000226698
GPN2	ENSG00000142751
NUDC	ENSG00000090273
GPATCH3	ENSG00000198746
C1orf172	ENSG00000175707
RP11	ENSG00000172746
OSTCP2	ENSG00000225294
TRNP1	ENSG00000253368
FAM46B	ENSG00000158246
SLC9A1	ENSG00000090020
WASF2	ENSG00000158195

dbSUPER

Number of super-enhancer constituents: 12
ID	Coordinate	Tissue/cell

SE_04452	chr1:27443699-27446281	Brain_Anterior_Caudate
SE_08182	chr1:27443042-27446505	Brain_Inferior_Temporal_Lobe
SE_09350	chr1:27445040-27447869	CD14
SE_26354	chr1:27443495-27446678	Duodenum_Smooth_Muscle
SE_31553	chr1:27442876-27446707	Gastric
SE_37352	chr1:27442925-27447248	HSMMtube
SE_41510	chr1:27443887-27446730	Left_Ventricle
SE_42522	chr1:27440149-27447035	Lung
SE_49041	chr1:27442852-27446947	Right_Atrium
SE_50517	chr1:27440047-27446702	Sigmoid_Colon
SE_52500	chr1:27440956-27446627	Small_Intestine
SE_53642	chr1:27440347-27446821	Spleen

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I027114

chr1

27440693

27447290

Enhancer Sequence

AACCAGTCTC AACTGCAGCA ATGAAAGGTA ATACTTCCCA ATGAAAGCCC AGCACTCTAC 60
AGTTTACAGC GGCACACTCT TAACCCATTT GCTCTCCACC ATAGTTCTGG GAAGTCACAA 120
TTACCATCCC CTTATTTTAC AGATGAGGAA ACTGAAGCAC ACAAAGGTTA AGCAACTTGA 180
TCAAAGTCAC ATGGCTGGTA ACTGGGATTC AAACCCAGGT AGTCTGGCTC CAGAGTCTGT 240
GTTCTTGGCC ACTCACTGTA TTATCCCTGG CTTTATTCTT ACTTTGTTTC TAAGGGGCGT 300
GTGAGCCTAG GACTAAAGAG GCCCAAAGCA GTTCCCAAAG GGCCAGCGGT AGGTTTTTCT 360
TTCCATGAGC TCTTCTCCAG GAAGTCTCCC ACTGCTTCTA CTCTAGTGGC CTAGTAAAGA 420
CTTCATGAAA TCCTTCCTAT CTTCAAAGGC TGCCCTCTCC AGGAAGCTCT CCTAAGTTAA 480
CTCAGCCAGG AGGGGAAGGT TGCAGTGAGC CAAGATTGCA CCACTGCACT 530