EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-00550

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:23939230-23940370

Target genes

Number: 14
Name	Ensembl ID

LUZP1	ENSG00000169641
HNRNPR	ENSG00000125944
ASAP3	ENSG00000088280
E2F2	ENSG00000007968
ID3	ENSG00000117318
RP5	ENSG00000203589
AL031295.1	ENSG00000244609
TCEB3	ENSG00000011007
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009
GALE	ENSG00000117308
HMGCL	ENSG00000117305
PNRC2	ENSG00000189266
SRSF10	ENSG00000188529

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_10300	chr1:23938099-23943334	CD19_Primary
SE_11050	chr1:23936367-23956768	CD20
SE_18996	chr1:23938003-23948106	CD4p_CD25-_Il17-_PMAstim_Th
SE_39565	chr1:23938163-23943200	Jurkat
SE_50077	chr1:23938069-23941212	Sigmoid_Colon
SE_55151	chr1:23938143-23941191	Thymus
SE_58372	chr1:23873313-23964782	Ly1
SE_66424	chr1:23938163-23943200	Jurkat

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I023611

chr1

23938198

23943278

Enhancer Sequence

TGTATCCTGG AGTCCACTGA GCTTTCCAAC CTTGTCTGAG GAGGCTCTTA AAATTGCTTC 60
TGTGTGACCC TGGCTTTCAT AGTAATCAAC TGAATGGTTC CCACCAGGGC CATGCACTAT 120
GCTTCACAGG CCATGCTTGC CCCATTCAGC CCTCACCATC ACCCTGTCCC CATTTTGCAG 180
ACAAGGAAAC TGAGGCCCAG AGAGGAGTTA TGACCTGCTC AGGCCTCCAC ATCTCAGAAA 240
CTGCAGAGCC AGGGGGACTT CTCCCAAGTC GAAGCTGGTA GTCCCCCCCT CCCAACCGCA 300
GGAAACCCAG ATTGTTATGA TTACTGGTAT TGTTGTCCAA AACAATACTG GAGACGATGA 360
CAATACAACA ATCATGGAGG GTGCTTATTT CCACTGGCTC AACAATTATC CCAACGCCCA 420
TATGGAGGGG GCCTGGGGCT TCAAGAAGAG GCTTCTCGAG GCAGGATGAA CAAACAAGCA 480
GTGAAAAGCC TGCAGCTGGG CCCCAGGTGC TGGAAGAGAG AGTGGGGCAG GAAGCGGGCA 540
GGCCATTTCT TTCCTCTTCT TTCTTATTTG TTTGAGAAGC AACTTTACTT TCTAAATCGG 600
TCATTGTCAC CCGTTAGCCC CCGCCCCACC TGGGCCAGGG CCTCTGGTGA CGGGAGCTCA 660
GGAGGAAGCT CTAGGGGGCA GGAGGGATGA GGGTGCGAGG TGGGGCAGGG CCTGGGCCCA 720
GCTGGACATG GGGGCTTCTT TCCTGCAGGG GCCTCATAGG CCACCTTCAG GTGACCTGGG 780
CCTGGCAGAC AGTACCTGCT GGAGGTGTGA CCTGAGTCCT CCAGGTTCAG CTGCCAGTGG 840
GGAGGGGAGG GAACCCTCAT CAACAGGGAA GTAGCTGGCA CGGTGGTCAG GGGCCTGGCT 900
CTGGAGTCAG ACCCATTTGG CTTCCACAGT CTGTCACCTC GGGCAAGTTA CTTCACCTCT 960
CTGAAAATGG GATGGTTTGT TGTGAAGATT AAAAATAATG AAACCACATG ACACATGGAA 1020
AGCATTTAAC ACGTTTACTA GCACTTAAGC ACATTTACCA CTGGAGATTT ACTTAAGAAG 1080
CCAATAGGTA TTGGGCATTT ACTATGCACC AGGCACTTTT AAAGCATTCT ACACGTATTA 1140