EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-00180

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:9433650-9435740

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SRF

MA0083.3

chr1:9435021-9435037

TCCCCAAATAAGGTCA

6.14

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_01570	chr1:9429215-9438678	Aorta
SE_04130	chr1:9435148-9437066	Brain_Anterior_Caudate
SE_05237	chr1:9435213-9437294	Brain_Cingulate_Gyrus
SE_05868	chr1:9435000-9437999	Brain_Hippocampus_Middle
SE_07340	chr1:9435345-9437082	Brain_Hippocampus_Middle_150
SE_08488	chr1:9435512-9437021	Brain_Inferior_Temporal_Lobe
SE_26667	chr1:9431035-9434618	Esophagus
SE_26667	chr1:9434737-9438661	Esophagus
SE_37396	chr1:9434740-9438309	HSMMtube
SE_46801	chr1:9435523-9435796	Ovary
SE_47313	chr1:9432723-9434685	Panc1
SE_50208	chr1:9434656-9438666	Sigmoid_Colon
SE_52461	chr1:9431026-9434569	Small_Intestine
SE_52461	chr1:9434923-9438052	Small_Intestine

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I009369

chr1

9429609

9437755

Enhancer Sequence

GTCTAGTTCA AAACATTATC ATCACCCCCA ATGGGGACCT CACACCCATT AGGCAGCCAC 60
TACCCATTCC CCTCCCCCAG CCCCTGGCAA CCACTAATCT ACTTTCTGTC TCGATTTGCC 120
TATTCTGGAC ATTTCTTATC AATGGTCTCA AACAATAGGT GACCCTCTGT GTCTGGCGTC 180
TTTCATTTCC AATTGGCTTT TTAAGGAGCT ACTCCCTGGC CCCTCCCCCA TGACTTCCCT 240
GTGTCTTTGT TTCCTTATTT CATCATATGG GAGAACATTT CCTCTTCTTA GGGTTATTGT 300
GAGAATTAAG TGAGCCATGT CTGTAAAGTG CTTAGAAGCT GGTCGCTGGT CTGGTCGCAG 360
GAAGCAATCA ATAAACATAG CTAGTATAAT TACTCCTCCA CCCCCCAGGG CACCCAGAGA 420
CCCTTGTTTA TGCTCCTAAA CTCACCGAAG TCACCTAGTC CATGAATGAC CCTTTCCTAG 480
AGGGCAACTT GCAGGGAAAT TGCCTGAGCC CAGGGGCCTC AGTTTATCAG ATCCAGTTTT 540
CTAAAAATCA GTCTGGTCAC CAGGGCTAAC AGAGAGTTGG GTGGTTAAGA GCTCTGTGGC 600
CTCGTGCAGC TCCTCTGATC CCTAGTTTCA AAATTATATT TGTTTCCTGG GGCTGCTATA 660
ACCAAGTACC ACACACTGGG TGACTTAAAA CAATGCACGT TTATTCTGTC CCAGCTGTGG 720
AGGCTGGAAG TCCAAAATCA AGGCGTGGGC AGGGCTGCAC TCCCTCCAGA AGTTCTAGAA 780
AAAGATCTGG CCTATGGCCA GGCGCAGTGG CTCACACCTG TAATCCCAGC ACTTTGGGAG 840
GCCGAGTTGG GTGGATCACT TGAGGCTGGG AGCTCGAGAC CAACCTGGCC AACATGGCGA 900
AGCCTCGTCT CTGTTAAAAA TACAAAAACT TAGCTAAAAA TACAAAAAAA TAGCCAGGTG 960
TGGTGGCGTG CGCCTGTAAT CCCAGCCATT CGGGAGGCTA AGGCACAAGA ATCACTTGAA 1020
CCTGGGAGGC AGAGGTTTCA GTGAGCCGAG ACTGCACCAC TGCACTCCAG CCCGGGCAAC 1080
AGAGTGAGAC TCTGTCTCAA AATAATCATA ATAATAACAA TAAATGTGAT TTAAAAAGAA 1140
AAAAGAAGAT CCATCCTGGC CTCTTCCAGC TTCCCGCAGC TTCTGACTGC ATGGCTTGTG 1200
GCTTGTGGCT GCATGGCTCC AATCTCTGCC TCTATCTTCT CATGGCCTCC TCCCCTCTGT 1260
GCCTCTGTCT GTCTTGTAAG AACACGTGTC ATTGGATTTA GGGCCCACCC AGATAATCCG 1320
GGATGATCTC ATCTCAAGAT TCTTAAATCA GTGACATCTG CTAAAACCCT TTCCCCAAAT 1380
AAGGTCACAT TCACAGTTTT CAGGATTAGG ACAAGACATA CCTGTGGAGT CCTAATTAGG 1440
GAAAAGGAGT CAGGCTGGCG GGACCAAGGG GAAGCAAGAT GAGAAAGCAG ATAAGCTGTA 1500
AATCTGCCTT TCTTCATGGT CCAGGACACA GCGCCCTCCT GCACAAATAA CTCTCAATCT 1560
TCCCGTGCCC AACTATCACC AGACCCTCAG CTGATAGGAA AACACATGTT AGCTCACTGC 1620
AACCTTGGCA TGTAAGTACT TCACAAAGCC CTCTTCAGCA CATGGCACAA GCACCATCCT 1680
GTAAAATCCC AGCAAGCCTT TGTCTCATTG CAATCAACAT CTCTCTTGCT GATCTGCACC 1740
CTTGCAACGT ATTTCCATAT TTTCTCTAAT AAATTTGCCT TTCTTTACCT ACAATTGTCT 1800
TGGTAAATTC TTCTTACCCC CATGCCACTG ACTAGGGGAG CCACCATGCA ACCCTCCACA 1860
CACACCTTCA GGGCAGAGTG CGTAATAGTA CCCACTCCTG GAGTGGCCAT GAAGACCGAT 1920
GAAACCAAGC AGGTAGAAAA GAGCTCAGCA CCAGGCCGAT GGTGGGTGCT GCCCAACAGG 1980
CCATGACTCC CATCCTTATT CGTGACATGC CATCTGCCTC CTGTCCTGGC CTCTTGCAGC 2040
CAGTCCCCTG AGACCAGATT TGCTCTAGAA TTAATTGGTC GATGTTCTAA 2090