EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-00022

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:1778540-1779670

Target genes

Number: 21
Name	Ensembl ID

CCNL2	ENSG00000221978
VWA1	ENSG00000179403
ATAD3B	ENSG00000160072
ATAD3A	ENSG00000197785
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
MMP23A	ENSG00000215914
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369
CALML6	ENSG00000169885
TMEM52	ENSG00000178821
C1orf86	ENSG00000162585
SKI	ENSG00000157933

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_05682	chr1:1777654-1779699	Brain_Cingulate_Gyrus
SE_09353	chr1:1778042-1779840	CD14
SE_11548	chr1:1775764-1782854	CD20
SE_23324	chr1:1777926-1779592	Colon_Crypt_1
SE_41740	chr1:1778865-1779471	LNCaP
SE_58439	chr1:1751668-1840814	Ly1
SE_61696	chr1:1751792-1802253	Toledo

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I001845

chr1

1777178

1779972

Enhancer Sequence

TATTAGTAAG GAAGAAAAGT GAGCCCCAGC ACTGAAGGCA GGCAGGGAGA GGCCAACTCT 60
ACTGCTTTGT GCAAATGCAG CCGGGTTTAT GATCAGGACT GCTCTTATCT ACAAAGCTGC 120
TAACCCCTGA GCCTTGAAGG GGAAGAGATA AACACCAGTT GCCAGTCTCT TGGTTGTGGA 180
ACAAGACTGG GACAACAAAA TCCCTTTTTC TGGACTGGTT CCATCGATGT TCTTTGTCTG 240
CAGTCAGGAA GTACACTTTG CCAGTAAGGG ATTGCCTTTT AAAGTTCTTT AGATATTGGA 300
CAAGGCCCCT GGCCACTCAG AACCCCATGA GTTCAATACT GACGGCAATG AAGTGGTCTA 360
CTTACCCCCA AACACAGCAC CTCTCCTTCA GCCTCTAGAT TAGGGGGTCA TAAGGACCTT 420
TAAGGCTCAT AACACACAGT ACTCTATGGA AAGAATTGTC AATGCTATGG AAGAGAATCC 480
CAATAGACAG AACATTGTTT AAGTCTGGAA GGATTATCCT GCTGAAGATG CCAAGGTTGT 540
TACAGAAAAA GCTGTGAAGG CCATGAGCCT GAAACAATCA ACTCCTGCTG GAGAGGACGA 600
CGTCCAGATG CTGCGCCTGA CCTCACAGGA TTTACGAGAG CCAGACGAGG AAATCATGAA 660
AAGACTGTGC ATATGCTTTT AAAAGGGTAG GGGGGTGGGT AAGGACTTCA ACATGTGGAT 720
CTTAGAGAAA TTCAAGAGCT ATTAGACACC ACACCAGAGG AATTAACAGA ACACACCTTG 780
ACAGATGTCA GTACTTCCAA CGTGGTGCCA AACGATGAGA AAGAAGCAGT GCCAAAAACA 840
CGTGGACACT GGGCAATCTG GCAGAAGGTC CCCATTCCCC AAGACTGCAC TTGACTTCTT 900
TAGGACACAG AGCTTTTATG GCACAGGAAC TAAAACTAAA GCATACAACA GAAGGTTGCT 960
ATCATACAGA AACTTTTTTA GAGAAATGAA AAAGCAGGCC GGGTGCGGTG GCTCAGGCCT 1020
GTACTCCCAG CACTTTGGGA GGCCAAAGCG GGCAGACCAC GAGATCAGGT GTTCCAGACC 1080
ACCCTGGCCA ACACAGTGAA ACTCTGTCTC TACTAAAAAT AAAAAAAATT 1130