| Tag | Content |
|---|
EnhancerAtlas ID | HS133-22402 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr3:58026780-58027980 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr3:58026946-58026967 | TTTTGCTTTCAGTATCACTTT | + | 6.7 | | RREB1 | MA0073.1 | chr3:58027242-58027262 | CTCCCCACCAACCACCACCA | + | 6.33 | | RREB1 | MA0073.1 | chr3:58027246-58027266 | CCACCAACCACCACCACCAC | + | 7.32 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_00762 | chr3:58026357-58028180 | Adipose_Nuclei | | SE_23194 | chr3:58026684-58027587 | Colon_Crypt_1 | | SE_27681 | chr3:58026398-58027802 | Fetal_Intestine | | SE_29426 | chr3:58025684-58027847 | Fetal_Intestine_Large | | SE_30574 | chr3:58026442-58027846 | Fetal_Muscle | | SE_36024 | chr3:58026477-58028276 | HMEC | | SE_37989 | chr3:58025669-58040227 | HUVEC | | SE_41579 | chr3:58026680-58028166 | LNCaP | | SE_45969 | chr3:58026358-58032250 | Osteoblasts | | SE_47269 | chr3:58019885-58040171 | Panc1 | | SE_56289 | chr3:58026661-58028194 | u87 | | SE_64106 | chr3:58026703-58027892 | HSMM | | SE_65730 | chr3:58025436-58027838 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I058034 | chr3 | 58020175 | 58032048 |
|
Enhancer Sequence | GGAACGGTGT TAATCCCGTT TTGCAGCTGA GGAAACTGAG GCTACATTTA CGGTCACCTA 60
GCTGGCAAGC AAGTGGCTGA GCCTGGAGCA GCAGCAGATC TGGGGAACTC CACAAACCAG 120
ATTTCTGTGT GGTATCCCTG TGGACACAAG GATTTAACTT GATTCTTTTT GCTTTCAGTA 180
TCACTTTATG ATATTACAAT GAGCTTGCAG TATTTATTTT CAGAAGAAAA GCCAGATTAT 240
TCCCATTTAT GAGAGAAGCA GCCAGGTGGG CAGGGATTTC CAGCGCTGAA CCAGCCAGTG 300
TGTGCATTGT CTCTTCCCGC TGAGCGGCCC TGGTGTGCTG GGTTAGTCTG TGAGCCACAG 360
GAAATGTTGT CAGGGCCTCT GGGCTTTTGG ATGTCAGCAG GCCTTCAGTG GTGAGGAGGT 420
TGTGGCTGGA CTCAGAGGAC TCCTTGCTTT TGCTGAACGA CCCTCCCCAC CAACCACCAC 480
CACCACCACC AGTGGGACTA GCCCATGAGC TGTAAGCCAA CCTTTTCCTT CCTAACTTAA 540
TTTTCCAAAG AATAGTAACT TACCCACCAC CACTGCAGTC ACTGGGCCGG GAAGACAAGC 600
ACTCTTGCCT TGAATCCATG CCTTGAGCCA GTAGCCTTGA CCCAGGGTAA AGCAGTTATG 660
TGCTTGGGTC ACCTGGGTCA TGTTTTTGAA ATTGCCTCAA GCCTACCTTA CAAATCCTTC 720
CTGGAACCCT GCTTGGCTTT TCTTTGTGGG CTTCCCTTAG GAGGGAAGCT TCCCGAGCAG 780
CTTGTCTTGA CTGTAGCCAG CTGGGTGGTC CCAGCCACAG AATTTAACTG TCAAACAGCA 840
CCAGAAGGGT TCCTCATCCA GCTGTCTTGC CCCAAGTGCC CTCTTTGCTT TCTTTTTAGA 900
GAGTTCTGAG ACTCATTAGA GAGTTTAGAG ATTTTAGCAT TCTTGAAGTT CTTTCTGTGG 960
TCAGTTTGGT GAACCACTTC ATTTCTAAAG TTTCTCAGTT GACCCCATTC TTCCCCAGCT 1020
TTGCATTCTC CATGAAGCCA CCTGTGTTTG GTGTGTATGG GTTTTCTGCA ACCTAGGTTG 1080
AACAAGTCCT CTAGAATCCT GAACAATTGG TGATTCATGC TGGCCTGGTT TTTCTAATTG 1140
GCCTGGAAAT GTGGCTGTAG TGGACACAAG TGGACTTGGC CTCCTCTTTG ATGCGGGTAA 1200
|
