EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-22265

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr3:48646140-48646590

Target genes

Number: 31
Name	Ensembl ID

MAP4	ENSG00000047849
NDUFB1P1	ENSG00000231884
CDC25A	ENSG00000164045
ZNF589	ENSG00000164048
MRPS18AP1	ENSG00000229759
CTD	ENSG00000228638
NME6	ENSG00000172113
PLXNB1	ENSG00000164050
CCDC72	ENSG00000232112
CCDC51	ENSG00000164051
RP11	ENSG00000244380
ATRIP	ENSG00000164053
TREX1	ENSG00000213689
SHISA5	ENSG00000164054
PFKFB4	ENSG00000114268
UCN2	ENSG00000145040
COL7A1	ENSG00000114270
UQCRC1	ENSG00000010256
SLC26A6	ENSG00000225697
NCKIPSD	ENSG00000213672
IP6K2	ENSG00000068745
PRKAR2A	ENSG00000224424
SLC25A20	ENSG00000178537
ARIH2	ENSG00000177479
C3orf71	ENSG00000221883
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RUNX1	MA0002.2	chr3:48646491-48646502	AAACCACAAAC	-	6.02
SRF	MA0083.3	chr3:48646317-48646333	TTCCCTTATATGGGCT	+	6.46
SRF	MA0083.3	chr3:48646317-48646333	TTCCCTTATATGGGCT	-	7.1

Enhancer Sequence

TTTTGGAAAA TCACACATTT CATTGTACTG TTAAAATGCA TTTGCTTCCT AAAATGTATT 60
TCTGGTCTAG CCTGGAGATT ATGACCTTGG GCAGTGAGGC TGACAGACCT GGACCCCTGC 120
AAGTCACCTA AGGTGTCTGA ATCCCATTTT CCGCATTATA AGAGGAGACA TGATCACTTC 180
CCTTATATGG GCTCCTTAAC AAAAGGCTGG AAAAGAATTT GGCCGCCTAC TTAACGGGCA 240
TTATATGCTA AATAATGTTG GCTTATAGTG AAGATTGTCC CGTGAAGCCA AGGCGTGGCT 300
AGGGTAGGGA ATGGGGCCAT TCTCGGGGTG AGTGGTCCTG GGTCCGAACC CAAACCACAA 360
ACGGGAAGAC TCGAGCCCAA GGTCACACCC CAACCAGGGA AAAGACGGCA GGCCCAACCT 420
GGAGGCCCTC TCCCCAAAAG CGTCCCCAAC 450