Tag | Content |
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EnhancerAtlas ID | HS133-19489 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:52549510-52553080 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr20:52552629-52552650 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 | IRF1 | MA0050.2 | chr20:52549880-52549901 | CTTTTCTTTCTTTTTCTTTTC | + | 6.65 | PRDM1 | MA0508.2 | chr20:52551963-52551973 | GTGAAAGTGA | - | 6.02 | ZNF263 | MA0528.1 | chr20:52552262-52552283 | CCCTTCCCTTTTTTCTCCTCT | - | 6.14 | ZNF263 | MA0528.1 | chr20:52552220-52552241 | TTCCCTTCCCTCCCCTCCCTT | - | 6.28 | ZNF263 | MA0528.1 | chr20:52552215-52552236 | TTCCCTTCCCTTCCCTCCCCT | - | 6.55 | ZNF263 | MA0528.1 | chr20:52552240-52552261 | TCTCCTCCCCTCCCCTCCCCT | - | 6.63 | ZNF263 | MA0528.1 | chr20:52552230-52552251 | TCCCCTCCCTTCTCCTCCCCT | - | 7.12 | ZNF263 | MA0528.1 | chr20:52552224-52552245 | CTTCCCTCCCCTCCCTTCTCC | - | 7.51 | ZNF263 | MA0528.1 | chr20:52552227-52552248 | CCCTCCCCTCCCTTCTCCTCC | - | 8.64 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_02347 | chr20:52550880-52552204 | Astrocytes | SE_09242 | chr20:52549594-52558523 | CD14 | SE_32564 | chr20:52549776-52553004 | GM12878 | SE_43881 | chr20:52549524-52553090 | MM1S | SE_44725 | chr20:52550546-52552444 | NHDF-Ad | SE_45734 | chr20:52550205-52552502 | Osteoblasts | SE_47103 | chr20:52549854-52553091 | Panc1 | SE_50210 | chr20:52550767-52552825 | Sigmoid_Colon | SE_54237 | chr20:52549938-52550582 | Spleen | SE_54237 | chr20:52550654-52552885 | Spleen | SE_55669 | chr20:52549620-52552919 | u87 | SE_58343 | chr20:52504838-52566516 | Ly1 | SE_59659 | chr20:52530452-52560771 | Ly4 | SE_61260 | chr20:52530677-52566553 | HBL1 | SE_61584 | chr20:52509092-52566555 | Toledo | SE_62724 | chr20:52509006-52567043 | Tonsil | SE_67521 | chr20:52549620-52552919 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I053933 | chr20 | 52549777 | 52553138 |
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Enhancer Sequence | GGCCTCCCAA AGTGCTGGAA TTACAGGTGT GAGCCACCAC ACTTGGCCTT CTATATATTT 60 TTTAAATCCC AGAAGACATT ATTATGATCT TTTAATAGAG TTGGTATTCG TTTAGATTTA 120 CCGACACATT TGTCCTTCTG TTGCTTTTAA TTCTTTCCTA TGTTTTTATT CTTCCATCTG 180 AGATCATTTT ATTTTTTTCT TAAAGAGTAT CTTTTAGTAT TTCTTTTAGT AAGGACCTGC 240 TGGTAATATA GAATTTAGTT TTTGTTTATC TGAAAACATA GCAATCTTCA ATTTTGATAG 300 CTATTTCTTA CTGGGTGTAG AACTATAGGT TGGCAGGGTT TTTTTTAAAC CCCTTTTGTT 360 TTTCTTTCTT CTTTTCTTTC TTTTTCTTTT CCATCTTATC TTTTTTTTTT TTTTTTAAGG 420 AGTTTGTCCT CAGACTTTGA TTAGTTCTGC TGAATCAGCT GTCAGTCTTA TTGTTGCTTT 480 CAATTGAAGT GGAGCACTGC ATCTCTCTTT TAGGATGCCT TCGAGGTATT TGTCTAGCTT 540 TCATGTTTGT ACTCAGTAGG TAAGATGGTC TGCAACTATG TAGCCATTTT TCCCAAGAGA 600 AATTTCACAT ATTAAATGGC TTTGGTTTTC CACAGATGAT GTTAGAGATA GCAAGTGGAG 660 GTAGAGGGAA TGAAGGGAGA TCAAATCAAG AGAGGTTAAG ATAGAGGAAG TAGCTTTACC 720 TAAGGTGAGT AGACCCTAGA CAACTGGCAG AACGCTGGGC CAAAGGAAAG ATATAGGGGG 780 CAGGATGGCA TTTTCTGCAG ATAAATGACC CCAGAAATTC AGACACTGTG ATATCCAATA 840 TTCACTTTAT ATCTCTCTTT ATTGTGTTGT ATTTCCCTTA AGTAAGTGAG GTTCAGAGAG 900 GATAATCAGC TTGTCCAACA TCAAACAGCC GGTCAGAGTG ACAGGCTGAC ATTCAAACTC 960 ATGCCAGTAG ACTCTAGATC CCACACCTTT CGCTGCTGAA CTATATTAAA GATCAGAGGC 1020 TTTTAAAGTT TTCTTATTAC AAATCATAAT AAGAAATACA TTTTGAGTCT ATACACATAC 1080 ATTAGTAATC AAAACAAACC TTCCACTAAT GGATGTTAAC CATATTACCC GTGATGCACC 1140 ATGAGCTTTC TGTTGTATTC TATTCTATTC CATTCTGTTC CATTCCATTT CATTTGCTGG 1200 ATCAACATAA GTGGGTTGGG CCCTGGCTTC AAATAAAAAC CACTGCTAAA GACAGGAACT 1260 TACCTTAAAG GTTAAAAAAA GTACATAACT CCGATTAGCC AAGAAAAACT CAGAAAGTGA 1320 GAAGGAAGGG CAAAAAAAAA AAAAAAAAAG TCACTTCTTT TTGTCTTTCA GGAATTTTAA 1380 TAATAAAACA GCTTTGGATC ACCTATTTTA GATTCTTCTA GTAGACAGCC CCCAGTAGAT 1440 TCCTTAACTT TTCAAATGGC ATTGAAAAAG CGAGGAAGTT ATTTCACCTC TTTGGGAGGC 1500 TGTCTCAGTC CTCTCTATCC ATTGGAGGGC AGGGCAGCCA CTCAATAAGT GTCTGTTGCA 1560 TGAGTCAAGT AAAGGATCAG ACCGGGGTGT CTCAGAGCCT TCCCTGCTCT TCTATTCTCT 1620 GTTAAGCCAC TGAATGAAGA AGGCTGCCAC ATTTTCCTCT GGGTCAATAT CAACAGCAAA 1680 ACAATATCCC AGAACGGTCA TTTCTGGGAC AATAAATAGT TTTCCAGAGC TGCTATCTTA 1740 GGCCTCTCTG CCACTAAGGG ATTAAAGAGA AATGCACACC CCTCCAGAAT TTCCTGTCCT 1800 GTCTTGCGGT TAACTTAAAA CATTTTCAAC TCCCGCCTCC CCCTTTCTCA CCATCTCTCT 1860 TCATGGTTAA AGAGGTTATA AATTTGCAAA GGAAATGATT AAGCAAATCC AGAAAATTTG 1920 GCCATGGGAC CTGATTTTTC AAGGCCTTAG TTTTTGAAAG CTGAAGAAAT CTGTCCACTG 1980 AAGGATTTGC ACATGAGTTT TTTAGTCTTA GGGCTGGGGC ATAATTTCCT GTTTTTGTAT 2040 TCTCAAAACT GTTAAGCTAC TTGTGAACAA CTGGCCAGCA AAGATAGGGA GGGGGCAGGG 2100 GATGCGGAGA GAGGGTTGTG AGCCCAGAGG GGAGGAGAAA GGCTGTTTCT CCTCAGTTCT 2160 CACAGAACCT CTATGAAAAT AGAAAGATTT ATTTATTTAT TTACTTTAAA GACTGTGAAG 2220 TAGAGACAAG GGGTAGATTC TAGACATTGA AGTTGGAGGT GTGAGTGGTA AAGAGGAGAA 2280 GAAACATGTT TTAGCAGGAA CTTGAATAAG CTGATTGAAA CTCAAAGAAC AGTCTGTTTC 2340 CATAAGCATG AACATTTCTT AGACACTCAT TTTGTGCTTT GCATGGAATA CATCGTTAAA 2400 TCCCCACAGC AACTCAGTGA GGTGGATTCT ACTAGTGTCT CCACTTTATG GATGTGAAAG 2460 TGAAGCTGGA AGAAGTTAAG GAACCTGCTC AAAGCCACGT GGCTAGCAAG TAGCACCACT 2520 GGGATTGCAA CCAAGGCTGT TTGGACCCAG AGCCTGTGTT CATAGCTACT GCTCTCTTCT 2580 GAAGATAAAG GAGGAGACAA GGATGTCAGC ATGACCATAG CATACATGTT CATTTATTTA 2640 GAGCCAGGGA AGGGGGTGGG ACACTAATCA AGGTTGCCCC TTCCCTTCAC TTCCCTTCCC 2700 TTCCCTTCCC TTCCCTTCCC TCCCCTCCCT TCTCCTCCCC TCCCCTCCCC TTCCCTTCCC 2760 TTTTTTCTCC TCTTAAAGCC ACCAACTGTG CTAGGTATTT GTATGTTTAC TCTCAGATCA 2820 TTTTTCCAAG CTTCTCTTCA AACTGCATTT CCCAGGTTCC ATTACCAACT GGCTTCTGGT 2880 TAAGTTCAGC CAGTGGGCGG CACTGACACG TATTTTTCCT GCCTCCTCCC TCCAGTCAAC 2940 AAAAAGGTAC TGCTTGCAGA AGCCTCCATT GGGTTCCAGC TACCCTCAAG CAGCCTCACC 3000 CCCATCCACA TGGGGTTCTA TTTCCCACAG GGTGCCGGGT TCCCTAGCTC CAGAAGCATC 3060 ACCTCTTCCC TTTGGCTGTG TGTCTCTAGT GGTGGTTCTT TTTGTAGCCT ATTTCTATTT 3120 CTTTCTTTCT TTTTTTTTTT AAATTATACT TTAAGTTTTA GGGTACATGT GCACAATGTG 3180 CAGGTTAGTT ACATAGGTAT ACATGTGCCA TGTTCTATTT CTAATCTCCG GGTGGGCCTC 3240 ACGGCCCCAT GGTTGTCTTT TCAACTCTTC CAGTACCTTT AAAACTAGCA CCCATATTAA 3300 TGTCCTTCTA TTCAGCTCCT TGTCATGGGA TAGAGGTTCC CGAGAAAACC CTAAGACACA 3360 GATCACAGAT TTTTCTTTTT TTTTTTTGGA ACAAAGTCTC GCTCTTGTCC CCCAGGCTGG 3420 AGTGCGATGG TGTGATCTCG GTTCATGGCA ACCTCTGCCT CCCGGGTTCA AGGGATTCTC 3480 CTGCCTCAGC CCCCCGAGTA GCTGGGATTA CAGGCGTCTG CCACCACACC CGGCTAATTT 3540 TTGTATTTTT AGTAGAGATG GGATTCTCCT 3570
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