| Tag | Content |
|---|
EnhancerAtlas ID | HS133-19465 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:52258550-52260540 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxd3 | MA0041.1 | chr20:52258820-52258832 | GTTTGTTTGTTT | + | 6.32 | | Nr2f6(var.2) | MA0728.1 | chr20:52260280-52260295 | TGAACTCCTGACCTC | - | 6.22 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_09307 | chr20:52257660-52261294 | CD14 | | SE_10450 | chr20:52258571-52260770 | CD19_Primary | | SE_11048 | chr20:52258120-52261162 | CD20 | | SE_33810 | chr20:52258441-52260745 | HCC1954 | | SE_35528 | chr20:52258473-52261048 | HepG2 | | SE_43386 | chr20:52258455-52262868 | MCF-7 | | SE_43699 | chr20:52258190-52260926 | MM1S | | SE_47117 | chr20:52257212-52264846 | Panc1 | | SE_49906 | chr20:52258545-52261740 | RPMI-8402 | | SE_58388 | chr20:52194578-52305868 | Ly1 | | SE_62075 | chr20:52258384-52278612 | Toledo | | SE_66461 | chr20:52258539-52260233 | Jurkat |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I053641 | chr20 | 52258232 | 52261155 |
|
Enhancer Sequence | TAAATAAATA AATAAAGTCT GTTAATTTAA AAATAAATAA ATGCTTAAAA GGCACTCTGT 60
CTAATGAGTA CAAAAATTGG AAGGAAAATG ACCCTTCACT TCACTGTTGC ATGAACAGGA 120
AATGGAAATG TTTTTGGGCA TATGTATCTC TTGGGAGAGT GAGGTGGAAA ACAATACCAG 180
CCACCATTCT TTAATTTGGA TTGATCCACT GTTCTTGATT TTGAATAGCA GGTGGCTTTG 240
CTGTGGTGTT ATTGTTGTTG CTCTTTTTTT GTTTGTTTGT TTGAGACAGA GTCTTGCTCT 300
GTCGCCTAGG CTGGAGCATA GTGGCGCGAT CTCGACTCAC TACAACCTCC GCCTCCCGGG 360
TTCAAGCGAT TCTCCTACTG GGATTACAAG CACATGACAC CATGCCCGGT TAATTTTTGT 420
ACTTTTAGTA GAGACAGGAT TTCACCATGT TGGTCAGGCT GGTCTCGAAC TCCTGACCTC 480
GTGAACCACC CACCTTGGCC TCCCAAAGTG CTGGGATTAT AGGCGTGAGT CACTGTGCCC 540
GAACGTTGCT CTTTAATGTT AGTATTTTGT TATCCCAAAG AAAGCTCTCA GACCACGGAG 600
ACTCTTAAAA GACAATATCA AATGTTTCAA CAACTGACAA ACCTCAGACT TCCTGTATTT 660
CTGTAAGTTG CAGTTTTCCC TTCCTTCTTC TTCTAATTTG TTAATATCTC TGGGGCCACA 720
GGCTCTCTCT CTCTCACACA GGTCTCTAAC TAGATCAGTG GATCAAAGGT GAGGCTTTGC 780
TAAGTAATCA GGGTAATTTC ACCGGTGTAG CAAGCTATTA AAAACAGACC TGCAGGGTTT 840
TTCAAGGACA ACCAAGGTAT TGATTTGGCA ACCAAAAACT CCTGTAGTGC AAGCAATAAT 900
ACACCAGGGC CAGTGTTTCC AACACCGTCA CAACTCCTCC CCCTCCCTGT CCCTAGTGAC 960
ATTACAAAAG GCACAGCTAA GGCCGATACT CCAGCTCCTA TGCCCCTGCT CCTGTCTTCA 1020
AAAGGAACGT CACTGTTATA AATTAGACAA GGGAAGAAAA ACCTCATTTC TTTGATGATT 1080
TTTTTAAAGA GCTTTGTTTT CCCACGCATA ATTGTTCTTC CTATTCATTA TGCCTTTATG 1140
TAGACTTTGC TTTTTCCTTT AAAGAATACA CTTCTTATGT AATTTGTTTT GCATTTCTGG 1200
AATGAGGAAC TTTTCTGCTC ATATTGTTGT TAAAATCTAG ACAACACGCC CGTGTGATAG 1260
ATCACCCTGA GCCTTGGAAG GAAATGATTC ACCACAATAC TGTAACTGAA AGTCGTCTAA 1320
CACCAGGGCT GGAAGGCAGG CTATGAACCG CTGCATTACC TGCGTGCAGC AGCAATGGGA 1380
GGCAGCCAGA GGTTCCCTCG GCCTGCCTAG CTCACTTCAG CTTTGTTCCT GTTCTGTTTC 1440
CTCCGTCCGA GTAGCAGGAT GCTGGAAATT CATCCTCCAT TTTTAAGTTT TAAAAGAAAC 1500
CCAAAAATTG TGATTTTTTT TTTTTTTTTG ACACCGAGTT TTGCTCTTGT CACCCAAGCT 1560
GAAGTGCAAT GGCACGATCT TGGCTCACTG CAACTTCTGC CTCCCAGGTT CAAGGGATTC 1620
TCCTGCCTTA GCCTCCTGAG TAGCTGGGAT TCCAGGTGCC CAGCATATGC CCAGCTAATT 1680
TTTGTATTTT TAGTAGACTC AGTGTTTCAC CATCTTGGTC AGGCTGGTCT TGAACTCCTG 1740
ACCTCAGGTG ATCTGCCCAT CTCAGCCTCC CAAAATGTTG GGATTACAGG GGTGAGCCAC 1800
TGCACCCAGC TGGGATTTTT AATAAGCCAC ATCTGCCCAA ATGGGCCTTT CCAGGCTACT 1860
GTCTTATAAT TTTGCACTTA AATTTGTATT TAAACCACAC ATTAATGCAC TGTATGGAAA 1920
AAGTGAACAC CAAACATACC TATTACTAAT AAAAAGATTT CAAACAATAA AGCCAAAAGA 1980
GCAGAGAAAC 1990
|
