| Tag | Content |
|---|
EnhancerAtlas ID | HS133-19393 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:49415880-49416690 |
Target genes | | Number: 15 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF9 | MA0653.1 | chr20:49415917-49415932 | AAAGAAACAGAAACT | + | 6.05 | | Zfx | MA0146.2 | chr20:49416156-49416170 | GGGGCCTGGGCCTC | + | 6.08 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_11723 | chr20:49414473-49419445 | CD20 | | SE_58579 | chr20:49406834-49466178 | Ly1 | | SE_60050 | chr20:49406682-49436336 | Ly4 | | SE_60522 | chr20:49406578-49439329 | DHL6 | | SE_61754 | chr20:49406650-49439299 | Toledo | | SE_63007 | chr20:49406599-49439727 | Tonsil |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I050798 | chr20 | 49414867 | 49417073 |
|
Enhancer Sequence | TAACCCACTG AAAGCACTTG TTGAAGTTTA TTTACCAAAA GAAACAGAAA CTGCGCCAGA 60
GCAGAGTCAC ATGCAGCCTC CACTTTTAAA GCTTAATTCA TTACCAGATC CCCAAGCTGG 120
AACAGTTTCC AGGTGGGCAC ATGAGCAGGA AAAGGAAAAC CTAGTTTGCG AACAGACCTG 180
GACAGCAGCC TCCTCCCAAC CAGCCTGTCT CCCGGGGGCA CTTTTGCCGC TTCCATGGAG 240
CAGCAGAAAT CTCAGTCCAG CCAACCCCGG CCTTAGGGGG CCTGGGCCTC CCTGTGAAGT 300
GGGGCCTGCT TCATTCAGCA CCTTCAGCCT CGGTATGTGC CAAGTCTTTC CTGGAGCTGG 360
GGACGCCACA GGCAGTGAGA CACATGAGGC CCTTCCCCTG TGGCACTGCC AGACAATAAA 420
CACATAACAA GGCCAGACAC AGTGGCTCAC GCCTGTAATC CTAGCACTTT GGGAGGCTGA 480
GGTGGGCGGA TCCTTTGTAC CCAGGAGTTC GAGACCAGCC TGGGCAACAT GGCAAAATCC 540
CGTCTCTACA AAAATTAGCT GGGCGTGGTG GTATGTGCCC CTGGTCCCAG CTACTAGAGA 600
GGCCGAGATG GGAAGATCAC CTGGGCTCTG GGAGGTGGAG GTTGCAGTGA GCTGAGATCG 660
CATCACTGCA CTCCAGCCTG GGCGACAGAG TGAGACCTAT CTCAAAAAAC AAAACAAAAT 720
GAAACCGTAA CAAAACCTCT AAACTGTAAT GAATGTTACA AAGCACAGAC ATGGGCGGAT 780
GTGAGATAGG GCACCTGTGT GTGCATAGAG 810
|
