| Tag | Content |
|---|
EnhancerAtlas ID | HS133-19346 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:48889750-48891150 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr20:48890239-48890260 | CTCTGCATTCAGTTTCATTTT | + | 6.23 | | IRF1 | MA0050.2 | chr20:48890245-48890266 | ATTCAGTTTCATTTTTCCTTT | + | 7.57 | | ZNF263 | MA0528.1 | chr20:48889954-48889975 | GAAGCAGGAGAGGGTGGTGGA | + | 6.2 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_00170 | chr20:48888682-48891942 | Adipose_Nuclei | | SE_00906 | chr20:48889239-48891123 | Adrenal_Gland | | SE_06489 | chr20:48887274-48891214 | Brain_Hippocampus_Middle | | SE_09235 | chr20:48885530-48903267 | CD14 | | SE_33539 | chr20:48887712-48896114 | H2171 | | SE_34443 | chr20:48890219-48890936 | HCT-116 | | SE_42334 | chr20:48886371-48896282 | Lung | | SE_48371 | chr20:48889174-48892050 | Psoas_Muscle | | SE_48864 | chr20:48889759-48891261 | Right_Atrium | | SE_50228 | chr20:48888830-48891742 | Sigmoid_Colon | | SE_51556 | chr20:48888715-48893165 | Skeletal_Muscle | | SE_53316 | chr20:48886589-48896316 | Spleen | | SE_65602 | chr20:48889881-48890786 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I050269 | chr20 | 48885538 | 48904691 |
|
Enhancer Sequence | AGTCTGGGGT AGGTTGGGGT TGGGGGTTCT GGAGGGAGGG TATTTATTGA GACCTCACTG 60
AGATGCAGCC ACCAAAGGAA AATATGGGGG AAGGTGTCAC AGGCAGCACA GCAAAGGCAT 120
AGGCCCGGAG TGGGGAATGA GGTTGATAGA TTTAAGGGAC AGGAAGGAAA TAGTGTTGCT 180
GGCGGGGCAT GAATGTAGGG GAGAGAAGCA GGAGAGGGTG GTGGAGACCA GGCTGGGGCC 240
ATACATCCAG GGCTCGGGGC CAGGGGTGGG CTCTGAATCA CATCTCCAAT GGGATGGGCA 300
GTCACTGGAG GGTCAAAGCA GGGAAGAGAC TTGGGCGGGA TCCCATTTCA GATCCCTCTG 360
GCTGTGTGAA GCAGGGACAC CCAGCCGGAG ATGGCCGCAG ATGTCCAGGC GAGCGAGGAT 420
GGCAACTTGG ACGGGGGCGA TGCCAGTGAA TGTGGGGAGA GATGGCCAGG CCTGGCGGGA 480
GGCCCAGGGC TCTGCATTCA GTTTCATTTT TCCTTTTACA CAATCCCCCC CGGCCCCGGG 540
CACTCTGGGT CACTGGACTT TCCCTGGCAC TGCCGGTGGG GCCCACAACC TGCTGGCAAT 600
CTGGCCTCTC CGAGTCCCAG CTGGTTCCCT GCCCTGTCCT GGACCCTTCC TCTCCAGGAA 660
CAGGCCCAGC TCCAGTTCCT CTGTCACTGT TTCCCACCAC CTCCTGCCCC AGGTCTGCCT 720
GGGCCCTGCT GATCTCCTAA TTCTGCCTCT GCTCCAGCAC CCCCTGCTCC AGCCCTGCTG 780
GCTGCCTGGG AGCCGGCAGA TGCTTCCTCT GAGCTGCCTT TTCCAGATCA AGTTTGCATC 840
CAAGGAAGCG AGCCTGAGAC TCCCAGCCAG CTGGGGGAGA CAAGTTCGAG GGAAGTACCC 900
CAAGGTAGCT TGCCAGAGGG CAGCCTCGCT CTTGGGCAGA TTTTTCCTCT GGTCCAGTTT 960
GTTGTTGGAT GGAGCAGGCA GATCTACCTT CCCCACTGAC TCAGGCCTTG GGTGCTCGGA 1020
TGGAGACTGT GGCCGAAGAG CTGTGTTGAG CAGGGCTCTG AGGCTGCATC TATGATACTA 1080
GGAAGGAGAC TCATTATTGA TTAGTGATGC CTGCTGTGGA CCCAGGATGG AGGATAGGGG 1140
CCACGCTGGC CTCATAGGTG TGTCTGCGGC ACCCAGTAGG TCCTCAGGTC TGCACTCCCC 1200
TGTTGTACCT CTAAATCTTC AAGTATAACA AATGCTGTTT GAAAATACCT TATGATGGTG 1260
GGCCGAGGTG GGAGGATCGC TTGAGGCCGG GAGTTCCAGA CCAGGCTGGG CAACAGAGTG 1320
AGAACCCATC TCTAGAGGGG AAAAAAAAAG AACTAGCTGA GTGTAGTGGT GCACGCCTGT 1380
AGTCCCAGTT ACTTGAGAGG 1400
|
