| Tag | Content |
|---|
EnhancerAtlas ID | HS133-19249 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:47324960-47328120 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| PBX1 | MA0070.1 | chr20:47324994-47325006 | ACATCAATCAAT | + | 6.44 | | RREB1 | MA0073.1 | chr20:47325734-47325754 | ACCCAAATCACCCAACCGCC | + | 6.01 | | TEAD1 | MA0090.2 | chr20:47327616-47327626 | ATGGAATGTG | - | 6.02 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_01671 | chr20:47327232-47329168 | Aorta | | SE_03141 | chr20:47324846-47327049 | Brain_Angular_Gyrus | | SE_03860 | chr20:47323285-47327360 | Brain_Anterior_Caudate | | SE_04767 | chr20:47318453-47329485 | Brain_Cingulate_Gyrus | | SE_05768 | chr20:47318218-47329731 | Brain_Hippocampus_Middle | | SE_06681 | chr20:47321409-47357433 | Brain_Hippocampus_Middle_150 | | SE_07719 | chr20:47323009-47329708 | Brain_Inferior_Temporal_Lobe | | SE_09151 | chr20:47324544-47327159 | CD14 | | SE_09151 | chr20:47327475-47330072 | CD14 | | SE_11697 | chr20:47327440-47329986 | CD20 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr20 | 47325290 | 47325340 | | chr20 | 47326644 | 47327044 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH20I048708 | chr20 | 47324545 | 47327159 | | GH20I048712 | chr20 | 47327669 | 47327710 |
|
Enhancer Sequence | TGGGGTAGAA TAGAGGTGGG GAGAAGAAAG CAAGACATCA ATCAATCCAG AGGAGACCCA 60
GGCCAGAGCT GAACCCAAGA AAACAGACAA AAACTCCTCG CCTGGTGGAC ATTACATTCT 120
AGTAAAGGAG ATGAGCCAAA GCAAAGAAAA CTCAGGTATG GAATCCAATG TCAAGCAGTG 180
GTAAACACTA GAAAGACAAA TCAGAATGAG GGAGAGGGAA GCATTGTTTC ACAAGGAGGT 240
CAGGGGAGGC CTCTCTCTGG AGGTGATGTT TGAGCAGAGG CCCTGGACAG AGCAAGAGAG 300
AGAGCCCTGC AAAAACCCGA GGGGAGAGCC TGCCGGGCAG GGGGCACCGT GGTGCGAAGG 360
GTCTGAGGCG GGCACATGTC TGGTATGTAA TGAGGAACAG AAAGGAGGCA GTGTGTCTGG 420
GGTGGAATAA ACGAGAGAGA GAAAAACAGA GAGATCCGCG GTCACAGAGG CGGCCCCAAC 480
ACTGCTCCTC CCCAGGCCCG GTTTTCTTAT CATAAGATGG GCATAAAAAA TACCCCACCT 540
TCACAAGGAT ATGGGACTGA GCAAATGAAG TGGCTCTTAA TCCATGAGAA GCCCCCTGCC 600
CCCACCGTTT CCCACTGCCA GCTCACCCCT CAACTCAGAC GCAGGCTGGG ACATTGCAAA 660
GGCCAGGCCA GTCTTAATCG AACATTCCAG CCAGTAAATG TGATGGGAGA GGAACTGAGG 720
AGGAAGGGAT CAGCTGGGAC TTGAGATATC AAGGAAGATT TTTCAGGCCA AATTACCCAA 780
ATCACCCAAC CGCCCCCGTC AGTCTTTCAT CCCGAACTGT GCTGGCAGAG ATAATTTTCT 840
TTAATCATCT GACCCAGAAA CACGCCCAAT AGCTCCAGTC TCTCCCCTAT GCCCTAGCTC 900
TCTGCTCCCT CGACGATCCA GATAACATCC CCGCAGATGT GACACTCTTG CATCGTAGTT 960
ACGAGCACAA ATGTAGGTTC AAGGGCTGAC TCTGCCCCTC ACTGTCTGGG TGACCTTGGG 1020
CCAGTCCCCT CTCTATCCCG GGCCTCGGCT TCATCATCTG CAAACCTGTG ATGATGAGGA 1080
TGATGGTGAT GACGATGACA GCAATTAATG TCTACTGAGC CTTCGCCCCA CGGTTTTAAG 1140
GTGGCTTCTG TTATTAGACC ATTTAACAGA TGGGCGGACT GAGGCACAGC AAGAAAGCCT 1200
AAGGCCTCGA AGAAGTACAA GGAGGAACTG GGATTTGAAC CCAGGCTGCC TGGTGCTGCT 1260
CATGGTTGTG GTAAGCAATA AATGAGGTAC TGTAGGAAAA GCACCAAGTA CATATATAGT 1320
AAGCACTCAA TATATGCGAG CCATTAGCAT TCTCCTTGCT GTATGACAAC ACGCTAGCTG 1380
TAACTGTGAG CAGCAATTTG CCACAAAAGG GTATTGTTCT GAGCACTCCC TGGAGTAAAC 1440
CAACTTCAAA CACATCCCTT CTTCATTCAC TTATTTTCTT CCCTGTCCGA AAACAAACAT 1500
CCTATTTTCT GAAGACCAGG TCCTAAGATT CCCAAGGCCC AGCTGGTCTG CATCATCAGG 1560
CCCCTGGGAC TTTGCTGAGC TCTTGCCACG CACCCAGGCA ATGTGCCCAA AGGATGCAAA 1620
AGAAGGGAGA TGGAGCCCTG CTCTTCCTCT GGAGGCCCCA GCAATGAGGC TGGAAAGGCA 1680
CTTCCCTGGG GGCTTGAGAA AGGCCCAGAG AGCAGCACCA TATCCTGAAA ATGCTGGTGA 1740
TCAATCAAAA GAGAAGCAAG CCCAGAAGGC TTCAGGAGGA AGCAACACAA AGGCAGGCAG 1800
GGCACCCAGG GCCAGCTCTG CTAATGCGGA GTGTATTTCG ACTCATTCTT CACTCAGCAA 1860
ATACTGGCTG AGCAACTGGT GTGAGCCTGA GCTGTGGAGG CTGGGCAAAG AACAAGATGG 1920
TCCTCTGGGA GCTCATGGTC AAGAGTAGAC CGGTCAACAA GGTAATGACT ATTACTACTA 1980
CCAACAGTAA CAACAGCTAA TACTCAGCAA GCCCTCAAGC TCCTGTCAAG CTCATTTGAT 2040
CCTCATGTCA ACTCTCTATC AGGTAGGCAC CATTATTCTT CTCGATTGGC AGATGCAAGA 2100
CCTGAGGCAC AGAGAGGTCA GACCGTTTGT CCAAGGTCAC ACAGCACATC TGAGCCCACC 2160
CAGTCTGACT CCAGAGTTTG TGCTCTAAAT CCCCGTGCTA TTTACGACTT TTCAGACAGT 2220
TAAGTACAAA TACTTTCCTC TCAAATAAAT ATATAATTTA TAGAATTAAA GGGACAATGA 2280
GTGAGGGAAG TGCCGTGGTC TGAGAAGGTC TCTCTGGAAA GACAGGCTTG CGAGCGAAGC 2340
TTGAATGAGG TGAGGCCACG GGCCACACTG CGTCTGCAGG AACAGCACTC CAGGAAGGAG 2400
AAGAGCACGT GCAAAGGCCC TGAGGCAGCG AGAAGCAGCA GGGAGGCCAG CGGAGCTGCA 2460
GCAGAGCAAG TGAGCGAGAG GGATGGACCA CAGATTCAGA CAAGCATGCC AAGGCCAGAT 2520
CACATGAGGC CGCAGTGGGG TGTTTGGGTT TCCTCCCAAG AGCCATGGGG AGGTGATGGG 2580
GGTATGAGCA GAGGCCTGAC ACCACCTTCT CACCCTTTAA AGGACCTCCC TGGCTGCTGA 2640
CAGGAGGATG CACGGGATGG AATGTGCAGT GAATATAAAG TGGGAAGACC AGTTATGGCT 2700
ACTGCCAAAG TCCAGGCAAG AGCAGAGGGT GGCACAGAAG CTCTGTGCCT CATTCACTCC 2760
ATGCATGCAT GTATCCACTC AGCCAGGCTC CAGTGTACCT GGCCCCATGT TGGGCTCTCT 2820
GTTGTACACA GATGACGGCA GACACTCCCC TAAGCCATCA GCCTGCTTGT AGGCATGTCC 2880
ACAAAGTTAC AATATAAGAC CGTGATCTTA TGACCATATT CAGTAATTCC ATTCGATCCT 2940
GCAAAGCTAC CCCAGTCCCA GGTTCCCTGA AGTGGTTTTT GGCATCTGGA CCTTTGTGAG 3000
GCCAGCCGAG GCCAGGGAGT GAATGTGGCC AGTCAGCTCC CGGTGGGCAG GGACAGAGGC 3060
TGCCAGTTAG TGAGACCCCC GCCCCAGGTT CTACCCATCA TCCCTTTCAT CCAAAGCAGG 3120
GGTCAAATGA CAGTCCAAGG ACTGAGTCCA ACCCATCACC 3160
|
